Provided by: python-biom-format_1.1.2-1_amd64
NAME
biom_validator - Test a biom file for adherence to the format specification
SYNOPSIS
biom_validator [options] {-i/--biom_fp BIOM_FP}
DESCRIPTION
[] indicates optional input (order unimportant) {} indicates required input (order unimportant) Test a biom file for adherence to the format specification. This specification is defined at http://biom-format.org. Example usage: Print help message and exit biom_validator -h Validate the my_data.biom file. biom_validator -i my_data.biom
OPTIONS
--version show program's version number and exit -h, --help show this help message and exit -v, --verbose Print information during execution -- useful for debugging [default: False] -f FORMAT_VERSION, --format-version=FORMAT_VERSION The specific format string, defaults to [default: Biological Observation Matrix 1.0.0] REQUIRED options: The following options must be provided under all circumstances. -i BIOM_FP, --biom_fp=BIOM_FP the BIological Observation Matrix filepath to validate [REQUIRED]