NAME

       bp_gccalc - GC content of nucleotide sequences

SYNOPSIS

         bp_gccalc [-f/--format FORMAT] [-h/--help] filename
         or
         bp_gccalc [-f/--format FORMAT] < filename
         or
         bp_gccalc [-f/--format FORMAT] -i filename

DESCRIPTION

       This scripts prints out the GC content for every nucleotide sequence from the input file.

OPTIONS

       The default sequence format is fasta.

       The sequence input can be provided using any of the three methods:

       unnamed argument
            bp_gccalc filename

       named argument
            bp_gccalc -i filename

       standard input
            bp_gccalc < filename

FEEDBACK

   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send
       your comments and suggestions preferably to the Bioperl mailing list.  Your participation
       is much appreciated.

         bioperl-l@bioperl.org                  - General discussion
         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
       resolution. Bug reports can be submitted via the web:

         https://redmine.open-bio.org/projects/bioperl/

AUTHOR - Jason Stajich

       Email jason@bioperl.org

HISTORY

       Based on script code (see bottom) submitted by cckim@stanford.edu

       Submitted as part of bioperl script project 2001/08/06