NAME

       gt-encseq-decode - Decode/extract encoded sequences.

SYNOPSIS

       gt encseq decode (sequence_file|indexname)

OPTIONS

       -mirrored
           virtually append the reverse complement of each sequence (default: no)

       -lossless
           allow lossless original sequence retrieval (default: no)

       -dir
           specify reading direction (fwd, cpl, rev, rcl) (default: fwd)

       -seq
           extract sequence identified by its number (default: undefined)

       -seqrange
           extract multiple consecutive sequences (default: undefined)

       -output
           specify output format (choose from fasta|concat) (default: fasta)

       -range
           concatenated range to extract (implies -output concat) (default: undefined)

       -sepchar
           specify character to print as SEPARATOR (default: |)

       -help
           display help for basic options and exit

       -help+
           display help for all options and exit

       -version
           display version information and exit

AUTHOR

       Report bugs to <gt-users@genometools.org>.

                                            10/07/2012                        GT-ENCSEQ-DECODE(1)