NAME

       imagej - A Java image processing program inspired by NIH Image.

SYNTAX

       imagej [option] <filename>
       imagej [-i image] [-b|-m] [arg1 ... argN]

DESCRIPTION

       Imagej  is  a  Java-based image processing program developed at the National Institutes of
       Health. ImageJ was designed with an open architecture that provides extensibility via Java
       plugins and recordable macros.  Custom acquisition, analysis and processing plugins can be
       developed using ImageJ's built-in editor and a Java compiler.  User-written  plugins  make
       it  possible  to  solve  many  image  processing and analysis problems, from 3-dimensional
       live-cell imaging,
        to radiological image processing, multiple imaging system data comparisons  to  automated
       hematology systems.  ImageJ's plugin architecture and built in development environment has
       made it a popular platform for teaching image processing.

       ImageJ can be run as an online applet, a downloadable application, or on any computer with
       a Java 1.1 or later virtual machine.

OPTIONS

       -h     Output help information and exit.

       -o     Open images in existing ImageJ panel if one exists.

       -p <N> Open images in existing ImageJ panel number <N>.

       -x <MB>
              Set available memory.

       -c     Enable plugin compilation within imagej.

       -v     Be verbose (vv or vvv increases verbosity).

       -e Macro Code
              Execute macro code.

       -r Menu Command
              Run  menu  command.   Quotation marks are required around commands including spaces
              Commands can be sent to open ImageJ panels with the -p option.

       -b macro
              Run macro without graphics window.

       -m macro
              Run macro, image will be opened before macro is run  all  following  arguments  are
              passed to macro.

FILES

       Most IMAGEJ add-on are taken from $HOME/.imagej.  The  system  wide
        equivalent is in /usr/share/imagej/

        HOME/.imagej/plugins/,
              you can find and put new plugins here

        HOME/.imagej/macros/,
              you can find and put new macros here

        HOME/.imagej/luts/,
              you can find and put new look up tables here

EXAMPLES

       For compiling plugins:

       imagej -c

SEE ALSO

       The program is fully documented at http://imagej.nih.gov/ij/download/src/docs/

AUTHOR

       ImageJ was written by Wayne Rasband <wsr@nih.gov>

       This   manual   page,   the   wrapper   and   packaging   was   done   by   Paolo   Ariano
       <paolo.ariano@unito.it>, for the Debian project.