NAME

       psw — Protein Smith-Waterman and other comparisons

SYNOPSIS

       psw [options ... ]  { seq1 seq2 }

DESCRIPTION

       psw is a short and sweet program for calculating smith waterman alginments quickly. It was mainly written
       as C driver to test the underlying code which is more useful in things like the Perl port.

OPTIONS

       -help     Show summary of options.

       -version  Show version of program.

SEE ALSO

       dba (1), dnal (1), estwise (1), estwisedb (1), genewise (1), genewisedb (1), genomewise (1), promoterwise
       (1), pswdb (1), scanwise (1), scanwise_server (1).

AUTHOR

       This  manual  page was written by Philipp Benner mail@philipp-benner.de for the Debian system (but may be
       used by others).  Permission is granted to copy, distribute and/or modify this document under  the  terms
       of the GNU General Public License, Version 2 any later version published by the Free Software Foundation.

       On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-
       licenses/GPL.

                                                                                                          PSW(1)