xenial (1) csg_density.1.gz

Provided by: votca-csg_1.2.4-2.1_amd64 bug

NAME
       csg_density - Part of the VOTCA package


SYNOPSIS
       csg_density [OPTION] [OPTIONPARAMETERS]


DESCRIPTION
       Calculates the mass density distribution along a box axis or radial density profile from reference point

       Please visit the program site at __http://www.votca.org__.


OPTIONS
       Allowed options:

       -h [ --help ]
              produce this help message

       --top arg
              atomistic topology file

       Mapping options:

       --cg arg
              [OPTIONAL]  coarse  graining  mapping definitions (xml-file). If no file is given, program acts on
              original trajectory

       Specific options::

       --axis arg (=r)
              [x|y|z|r] density axis (r=spherical)

       --bins arg (=50)
              bins

       --out arg
              Output file

       --rmax arg
              rmax (default for [r] =min of all box vectors/2, else l )

       --scale arg (=1)
              scale factor for the density

       --molname arg (=*)
              molname

       --filter arg (=*)
              filter bead names

       --ref arg
              reference zero point

       Trajectory options:

       --trj arg
              atomistic trajectory file

       --begin arg (=0)
              skip frames before this time

       --first-frame arg (=0)
              start with this frame

       --nframes arg
              process the given number of frames


AUTHORS
       Written and maintained by the VOTCA Development Team <devs@votca.org>

       This Manual Page was converted from t2t format to the this format  by  txt2tags  (http://txt2tags.org)  !
       The t2t file was extracted from 'csg_density --help' by help2t2t (version 1.2.4 )


       Copyright 2009-2011 The VOTCA Development Team (http://www.votca.org)

       Licensed  under  the  Apache  License,  Version  2.0 (the "License"); you may not use this file except in
       compliance with the License.  You may obtain a copy of the License at

           http://www.apache.org/licenses/LICENSE-2.0

       Unless required by applicable law or agreed to in writing, software  distributed  under  the  License  is
       distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
       See the License for the specific language governing permissions and limitations under the License.