NAME

       overlap - Overlap computation

SYNOPSIS

       overlap [options] image0 image1 [image2 ...]

DESCRIPTION

       Compute overlap measures between two or more images

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Main Options
       --pad-in <double>, -p <double>
            Define padding value for input images [Default: disabled]

       --mask <string>, -m <string>
            Mask file for optional region-based analysis [Default: NONE]

       --num-labels <integer>, -N <integer>
            Number of label values [default: autodetect] [Default: 0]

       --first-label <integer>, -f <integer>
            Index  of first label value [default: 0]; labels below this one are ignored [Default:
            0]

       --by-label
            Analysis by label, i.e., separately for each label in given (detected) range

AUTHORS

       Torsten Rohlfing, with contributions from Michael  P.  Hasak,  Greg  Jefferis,  Calvin  R.
       Maurer, Daniel B. Russakoff, and Yaroslav Halchenko

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on
       Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data  Integration  Component.  From
       April  2009  through September 2011, CMTK development and maintenance was supported by the
       NIBIB under Grant EB008381.