NAME

       probe - Probe image data.

SYNOPSIS

       probe InputImage

DESCRIPTION

       This  tool  prints  pixel  values  or  symbolic  labels  at  a list of user-provided image
       coordinates.

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Main Options
       --coordinates
            Coordinate specification mode.  Supported values: "absolute", "indexed",  "relative",
            "physical", where the default is "absolute", or use one of the following:

            --absolute
                 Use absolute volume coordinates. For each dimension, the valid range is [0,FOV].
                 [This is the default]

            --indexed
                 Use grid indexes to specify coordinates. For each  dimension,  the  valid  value
                 range is [0,Dims-1].

            --relative
                 Use relative volume coordinates. For each dimension, the valid range is [0,1].

            --physical
                 Use  physical  volume coordinates. Each given location is transformed into image
                 coordinates via the inverse of the images's index-to-physical space matrix.

       --interpolation
            Image interpolation method.  Supported values: "nn", "linear", "cubic", "pv",  "sinc-
            cosine", "sinc-hamming", where the default is "nn", or use one of the following:

            --nn Nearest neighbor interpolation [This is the default]

            --linear
                 Trilinear interpolation

            --cubic
                 Tricubic interpolation

            --pv Partial volume interpolation

            --sinc-cosine
                 Sinc interpolation with cosine window

            --sinc-hamming
                 Sinc interpolation with Hamming window

       --sinc-window-radius <integer>
            Window radius for Sinc interpolation [Default: 3]

       --no-reorient
            Disable image reorientation into RAS alignment.

AUTHORS

       Torsten  Rohlfing,  with  contributions  from  Michael  P. Hasak, Greg Jefferis, Calvin R.
       Maurer, Daniel B. Russakoff, and Yaroslav Halchenko

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on
       Alcohol  and  Neurodevelopment  in Adolescence (N-CANDA): Data Integration Component. From
       April 2009 through September 2011, CMTK development and maintenance was supported  by  the
       NIBIB under Grant EB008381.