xenial (1) cmtk-split.1.gz

Provided by: cmtk_3.2.2-1.4_amd64 bug

NAME

       split - Split images

SYNOPSIS

       split InputImage OutputImagePattern

DESCRIPTION

       Split volume image into sub-images, i.e., to separate interleaved images into passes

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Orientation Options
       --slice-orientation
            Define  slice axis for splitting.  Supported values: "axial", "sagittal", "coronal", "interleave-x",
            "interleave-y", "interleave-z", where the default is "axial", or use one of the following:

            --axial, -a
                 Interleaved axial images [This is the default]

            --sagittal, -s
                 Interleaved sagittal images

            --coronal, -c
                 Interleaved coronal images

            --interleave-x, -x
                 Interleaved along x axis

            --interleave-y, -y
                 Interleaved along y axis

            --interleave-z, -z
                 Interleaved along z axis [This is the default]

   Splitting Options
       --factor <integer>, -f <integer>
            Interleave factor. This is the number of subimages generated. If this is set to zero, a separate  2D
            output  image  is generated for each slice in the input (in the given slice orientation).  [Default:
            2]

   Output Options
       --padded, -p
            Padded output, i.e., fill in removed slices

       --output-xform-path <string>
            Optional path template (fprintf-style) for  output  affine  transformation  that  maps  input  image
            coordinates to each output image.  [Default: NONE]

AUTHORS

       Torsten  Rohlfing,  with  contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B.
       Russakoff, and Yaroslav Halchenko

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium  on  Alcohol  and
       Neurodevelopment  in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September
       2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.