NAME

       fastq_to_fasta - Convert FASTQ files to FASTA files

DESCRIPTION

       usage:  fastq_to_fasta  [-h] [-r] [-n] [-v] [-z] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.14 by
       A. Gordon (assafgordon@gmail.com)

       [-h]   = This helpful help screen.

       [-r]   = Rename sequence identifiers to numbers.

       [-n]   = keep sequences with unknown (N) nucleotides.

              Default is to discard such sequences.

       [-v]   = Verbose - report number of sequences.

       If [-o] is specified,
              report will be printed to STDOUT.

              If [-o] is not specified (and output goes to STDOUT), report will be printed to STDERR.

       [-z]   = Compress output with GZIP.

       [-i INFILE]
              = FASTA/Q input file. default is STDIN.

              [-o OUTFILE] = FASTA output file. default is STDOUT.

SEE ALSO

       The quality of this automatically generated manpage might be insufficient.  It is suggested to visit

              http://hannonlab.cshl.edu/fastx_toolkit/commandline.html

       to get a better layout as well as an overview about connected FASTX tools.

fastq_to_fasta 0.0.14                              August 2015                                 FASTQ_TO_FASTA(1)