NAME

       fastq_to_fasta - Convert FASTQ files to FASTA files

DESCRIPTION

       usage:  fastq_to_fasta  [-h]  [-r]  [-n]  [-v] [-z] [-i INFILE] [-o OUTFILE] Part of FASTX
       Toolkit 0.0.14 by A. Gordon (assafgordon@gmail.com)

       [-h]   = This helpful help screen.

       [-r]   = Rename sequence identifiers to numbers.

       [-n]   = keep sequences with unknown (N) nucleotides.

              Default is to discard such sequences.

       [-v]   = Verbose - report number of sequences.

       If [-o] is specified,
              report will be printed to STDOUT.

              If [-o] is not specified (and output goes to STDOUT), report  will  be  printed  to
              STDERR.

       [-z]   = Compress output with GZIP.

       [-i INFILE]
              = FASTA/Q input file. default is STDIN.

              [-o OUTFILE] = FASTA output file. default is STDOUT.

SEE ALSO

       The  quality  of  this  automatically  generated  manpage  might  be  insufficient.  It is
       suggested to visit

              http://hannonlab.cshl.edu/fastx_toolkit/commandline.html

       to get a better layout as well as an overview about connected FASTX tools.