xenial (1) fastqselect.1.gz

NAME

       fastqselect - select fastq sequences in a file

DESCRIPTION

       This  script  selects  fastq  sequences in a file according to names given in a name file.  Given a FASTQ
       file (and possibly a FASTQ quality file) and a file with names of reads, select the  sequences  from  the
       input FASTQ (and quality file) and writes them to an output FASTQ.

       If  fastq  quality  file is present (same basename, but with .qual appended), then also selects sequences
       from there.

       Please check out the documentation below for more detailed information.

SYNOPSIS

       fastqselect <options>

OPTIONS

       -infile
              name   filename containing all fastq sequences

       -name  name   filename containing all names of sequences to select

       -outfile name
              filename where to write selcted sequences to

SEE ALSO

       fastaselect(1)

       A  more  extensive  documentation  is  provided  in  the  mira-doc  package   and   can   be   found   at
       /usr/share/doc/mira-assembler/DefinitiveGuideToMIRA.html.

       You can also subscribe one of the MIRA mailing lists at

              http://www.chevreux.org/mira_mailinglists.html

       After subscribing, mail general questions to the MIRA talk mailing list:

              mira_talk@freelists.org

BUGS

       To report bugs or ask for features, please use the new ticketing system at:

              http://sourceforge.net/apps/trac/mira-assembler/

AUTHOR

       The author of the mira code is Bastien Chevreux <bach@chevreux.org>

       This  manual  page  was  written by Andreas Tille <tille@debian.org> but can be freely used for any other
       distribution.