NAME

       gt-encseq-bitextract - Extracts internal data from encoded sequences.

SYNOPSIS

       gt encseq bitextract [option ...] [indexname]

DESCRIPTION

       -mirrored [yes|no]
           mirror sequence (default: no)

       -stoppos [value]
           output stop positions (default: undefined)

       -specialranges [yes|no]
           output special ranges (default: no)

       -bitpos [value]
           extract and display two bit encoding for position (default: undefined)

       -dir [string]
           specify reading direction (fwd, cpl, rev, rcl) (default: fwd)

       -help
           display help and exit

       -version
           display version information and exit

REPORTING BUGS

       Report bugs to <gt-users@genometools.org>.