NAME

       gt-encseq-check - Check the consistency of an encoded sequence file.

SYNOPSIS

       gt encseq check [option ...] [file]

DESCRIPTION

       -scantrials [value]
           specify number of scan trials (default: 0)

       -multicharcmptrials [value]
           specify number of multicharacter trials (default: 0)

       -prefixlength [value]
           prefix length (default: 0)

       -nocheckunit [yes|no]
           do not run checkextractunitatpos (default: no)

       -mirrored [yes|no]
           use mirrored encseq (default: no)

       -v [yes|no]
           be verbose (default: no)

       -help
           display help and exit

       -version
           display version information and exit

REPORTING BUGS

       Report bugs to <gt-users@genometools.org>.

GenomeTools 1.5.8                                  02/07/2016                                 GT-ENCSEQ-CHECK(1)