NAME

       gt-seqstat - Calculate statistics for fasta file(s).

SYNOPSIS

       gt seqstat [options] file [...]

DESCRIPTION

       -v [yes|no]
           be verbose (default: no)

       -distlen [yes|no]
           show distribution of sequence length (default: no)

       -b [value]
           bucket size for distlen option (default: 100)

       -binary [yes|no]
           use a binary format for distlen output output filename: <first_input_filename>.distlen bucketsize: 1
           (default: no)

       -contigs [yes|no]
           summary of contigs set statistics (default: yes)

       -astretch [yes|no]
           show distribution of A-substrings (default: no)

       -genome [value]
           set genome length for NG50/NG80 calculation (default: 0)

       -help
           display help for basic options and exit

       -help+
           display help for all options and exit

       -version
           display version information and exit

REPORTING BUGS

       Report bugs to <gt-users@genometools.org>.

GenomeTools 1.5.8                                  02/07/2016                                      GT-SEQSTAT(1)