xenial (1) marscan.1e.gz

Provided by: emboss_6.6.0+dfsg-3build1_amd64 bug

NAME
       marscan - Finds matrix/scaffold recognition (MRS) signatures in DNA sequences


SYNOPSIS
       marscan -sequence seqall -outfile report

       marscan -help


DESCRIPTION
       marscan is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
       is part of the "Nucleic:Gene finding,Nucleic:Functional sites,Nucleic:Transcription" command group(s).


OPTIONS
   Input section
       -sequence seqall

   Output section
       -outfile report
           File for output of MAR/SAR recognition signature (MRS) regions. This contains details of the MRS in
           normal GFF format. The MRS consists of two recognition sites, one of 8 bp and one of 16 bp on either
           sense strand of the genomic DNA, within 200 bp of each other.


BUGS
       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).


SEE ALSO
       marscan is fully documented via the tfm(1) system.


AUTHOR
       Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.


       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
       redistributed under the same terms as EMBOSS itself.