NAME

       mia-3dvf2transform - Convert a 3D vectorfield from a 3D transformation.

SYNOPSIS

       mia-3dvf2transform -i <in-file> -o <out-file> [options]

DESCRIPTION

       mia-3dvf2transform  Creates  a  3D  transformation  from a vector field. The input vector field is simply
       encapsulated into the transformation file format. The boundary  conditions  and  the  image  interpolator
       kernel can be set at the command line.

OPTIONS

              -i --in-file=(input, required); io
                     input transformation   For supported file types see PLUGINS:3dvf/io

              -o --out-file=(output, required); io
                     output vector field   For supported file types see PLUGINS:3dtransform/io

              -k --imgkernel=bspline:d=3
                     image interpolator kernel which is used when the transformation is applied to an imageimage
                     interpolator  kernel  which  is  used  when  the transformation is applied to an image  For
                     supported plugins see PLUGINS:1d/splinekernel

              -b --imgboundary=mirror
                     Boundary condition applied when the transformation is used to  transform  an  imageBoundary
                     condition  applied  when  the  transformation  is used to transform an image  For supported
                     plugins see PLUGINS:1d/splinebc

   Help & Info
              -V --verbose=warning
                     verbosity of output, print  messages  of  given  level  and  higher  priorities.  Supported
                     priorities starting at lowest level are:
                        info ‐ Low level messages
                        trace ‐ Function call trace
                        fail ‐ Report test failures
                        warning ‐ Warnings
                        error ‐ Report errors
                        debug ‐ Debug output
                        message ‐ Normal messages
                        fatal ‐ Report only fatal errors

                 --copyright
                     print copyright information

              -h --help
                     print this help

              -? --usage
                     print a short help

                 --version
                     print the version number and exit

   Processing
                 --threads=-1
                     Maxiumum  number  of  threads to use for processing,This number should be lower or equal to
                     the number of logical processor cores in the machine. (-1:  automatic  estimation).Maxiumum
                     number  of threads to use for processing,This number should be lower or equal to the number
                     of logical processor cores in the machine. (-1: automatic estimation).

PLUGINS: 1d/splinebc

       mirror    Spline interpolation boundary conditions that mirror on the boundary

                     (no parameters)

       repeat    Spline interpolation boundary conditions that repeats the value at the boundary

                     (no parameters)

       zero      Spline interpolation boundary conditions that assumes zero for values outside

                     (no parameters)

PLUGINS: 1d/splinekernel

       bspline   B-spline kernel creation , supported parameters are:

                     d = 3; int in [0, 5]
                       Spline degree.

       omoms     OMoms-spline kernel creation, supported parameters are:

                     d = 3; int in [3, 3]
                       Spline degree.

PLUGINS: 3dtransform/io

       bbs       Binary (non-portable) serialized IO of 3D transformations

                     Recognized file extensions:  .bbs

       datapool  Virtual IO to and from the internal data pool

                     Recognized file extensions:  .@

       vista     Vista storage of 3D transformations

                     Recognized file extensions:  .v, .v3dt

       xml       XML serialized IO of 3D transformations

                     Recognized file extensions:  .x3dt

PLUGINS: 3dvf/io

       cvista    obsolete 3d vector field io plugin for range compressend vista (saving not supported)

                     Recognized file extensions:  .CVF, .cvf

                     Supported element types:
                       floating point 32 bit

       datapool  Virtual IO to and from the internal data pool

                     Recognized file extensions:  .@

       vista     a 3d vector field io plugin for vista

                     Recognized file extensions:  .V, .VF, .v, .vf

                     Supported element types:
                       floating point 32 bit

       vtk       3D Vector field in- and output (experimental). No attributes are stored or read.

                     Recognized file extensions:  .VTK, .VTKVF, .vtk, .vtkvf

                     Supported element types:
                       floating point 32 bit

EXAMPLE

       Transform the input vector field field.vtk to the transformation trans.v3df  and  specify  zero  boundary
       conditions and b-splines of degree 2 for image interpolation.

       mia-3dvf2transform -i field.vtk -o trans.v3df --imgkernel bspline:d=2 --imgboundary zero

AUTHOR(s)

       Gert Wollny

COPYRIGHT

       This  software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain.  It comes  with  ABSOLUTELY
       NO WARRANTY  and  you  may redistribute it under the terms of the GNU GENERAL PUBLIC  LICENSE  Version  3
       (or later). For more information run the program with the option '--copyright'.

USER COMMANDS                                        v2.2.7                                mia-3dvf2transform(1)