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NAME

       sinfo_rec_mdark - Master dark and hot pixels mask generation.

SYNOPSIS

       esorex sinfo_rec_mdark [OPTIONS] FILE.sof

DESCRIPTION

       This recipe perform raw sinfo_dark data reduction.

       The input files are raw sinfo_dark images Their associated tags should be DARK.

       The  output  are a master sinfo_dark (PRO.CATG=MASTER_DARK) and a hot pixels bad pixel map
       (PRO.CATG=BP_MAP_HP)

OPTIONS

       --gen-overpar <bool>
              Overwrite DRS ini parameters:  (bool; default: True). The full name of this  option
              for  the EsoRex configuration file is sinfoni.general.overwrite_parameters [default
              = True].

       --lc_sw <bool>
              Correct for bad lines introduced by instrument software:  (bool;  default:  False).
              The   full   name   of   this   option   for   the  EsoRex  configuration  file  is
              sinfoni.general.lc_sw [default = False].

       --lc_kappa <long>
              Kappa sigma value (long; default: 18). The full name of this option for the  EsoRex
              configuration file is sinfoni.general.lc_kappa [default = 18].

       --lc_filt_rad <long>
              Filtering  radii  applied during median filter. Should be small (long; default: 3).
              The  full  name  of  this   option   for   the   EsoRex   configuration   file   is
              sinfoni.general.lc_filt_rad [default = 3].

       --bp_noise-thresh_sigma_fct <float>
              Threshold  Sigma  Factor:  If the mean noise exceeds this threshold times the clean
              standard deviation of the clean mean the corresponding pixels are declared  as  bad
              (float;  default:  10.0). The full name of this option for the EsoRex configuration
              file is sinfoni.bp_noise.thresh_sigma_factor [default = 10.0].

       --bp_noise-lo_rej <float>
              low_rejection: percentage of rejected low intensity pixels before averaging (float;
              default:  10.0).  The full name of this option for the EsoRex configuration file is
              sinfoni.bp_noise.low_rejection [default = 10.0].

       --bp_noise-hi_rej <float>
              high_rejection: percentage of  rejected  high  intensity  pixels  before  averaging
              (float;  default:  10.0). The full name of this option for the EsoRex configuration
              file is sinfoni.bp_noise.high_rejection [default = 10.0].

       --dark-lo_rej <float>
              lower rejection (float; default: 0.1). The full name of this option for the  EsoRex
              configuration file is sinfoni.dark.low_rejection [default = 0.1].

       --dark-hi_rej <float>
              higher rejection (float; default: 0.1). The full name of this option for the EsoRex
              configuration file is sinfoni.dark.high_rejection [default = 0.1].

       --dark-qc_ron_xmin <long>
              qc_ron_xmin (long; default: 1). The  full  name  of  this  option  for  the  EsoRex
              configuration file is sinfoni.dark.qc_ron_xmin [default = 1].

       --dark-qc_ron_xmax <long>
              qc_ron_xmax  (long;  default:  2048).  The  full name of this option for the EsoRex
              configuration file is sinfoni.dark.qc_ron_xmax [default = 2048].

       --dark-qc_ron_ymin <long>
              qc_ron_ymin (long; default: 1). The  full  name  of  this  option  for  the  EsoRex
              configuration file is sinfoni.dark.qc_ron_ymin [default = 1].

       --dark-qc_ron_ymax <long>
              qc_ron_ymax  (long;  default:  2048).  The  full name of this option for the EsoRex
              configuration file is sinfoni.dark.qc_ron_ymax [default = 2048].

       --dark-qc_ron_hsize <long>
              qc_ron_hsize (long; default: 4). The full  name  of  this  option  for  the  EsoRex
              configuration file is sinfoni.dark.qc_ron_hsize [default = 4].

       --dark-qc_ron_nsamp <long>
              qc_ron_nsamp  (long;  default:  100).  The  full name of this option for the EsoRex
              configuration file is sinfoni.dark.qc_ron_nsamp [default = 100].

       --dark-qc_fpn_xmin <long>
              qc_fpn_xmin (long; default: 1). The  full  name  of  this  option  for  the  EsoRex
              configuration file is sinfoni.dark.qc_fpn_xmin [default = 1].

       --dark-qc_fpn_xmax <long>
              qc_fpn_xmax  (long;  default:  2047).  The  full name of this option for the EsoRex
              configuration file is sinfoni.dark.qc_fpn_xmax [default = 2047].

       --dark-qc_fpn_ymin <long>
              qc_fpn_ymin (long; default: 1). The  full  name  of  this  option  for  the  EsoRex
              configuration file is sinfoni.dark.qc_fpn_ymin [default = 1].

       --dark-qc_fpn_ymax <long>
              qc_fpn_ymax  (long;  default:  2047).  The  full name of this option for the EsoRex
              configuration file is sinfoni.dark.qc_fpn_ymax [default = 2047].

       --dark-qc_fpn_hsize <long>
              qc_fpn_hsize (long; default: 2). The full  name  of  this  option  for  the  EsoRex
              configuration file is sinfoni.dark.qc_fpn_hsize [default = 2].

       --dark-qc_fpn_nsamp <long>
              qc_fpn_nsamp  (long;  default:  1000).  The full name of this option for the EsoRex
              configuration file is sinfoni.dark.qc_fpn_nsamp [default = 1000].

       Note that it is possible to create a configuration file containing  these  options,  along
       with  suitable default values. Please refer to the details provided by the 'esorex --help'
       command.

SEE ALSO

       The full documentation for the sinfo pipeline can be downloaded as a PDF  file  using  the
       following URL:

              ftp://ftp.eso.org/pub/dfs/pipelines/sinfoni/sinfo-pipeline-manual-19.0.pdf

       An   overview   over   the   existing   ESO  pipelines  can  be  found  on  the  web  page
       http://www.eso.org/sci/software/pipelines/.

       Basic documentation about the EsoRex program can be found at the esorex (1) man page.

       It is possible to call the pipelines  from  python  using  the  python-cpl  package.   See
       http://packages.python.org/python-cpl/index.html for further information.

       The  other recipes of the sinfo pipeline are sinfo_rec_detlin(7), sinfo_rec_distortion(7),
       sinfo_rec_jitter(7),   sinfo_rec_mflat(7),    sinfo_rec_pupil(7),    sinfo_rec_wavecal(7),
       sinfo_utl_bp_mask_add(7),        sinfo_utl_cube2ima(7),        sinfo_utl_cube2spectrum(7),
       sinfo_utl_cube_arith(7),       sinfo_utl_cube_combine(7),        sinfo_utl_cube_create(7),
       sinfo_utl_ima_arith(7),      sinfo_utl_ima_line_corr(7),      sinfo_utl_line_oh_select(7),
       sinfo_utl_skycor(7),    sinfo_utl_skymap(7),    sinfo_utl_spectrum_divide_by_blackbody(7),
       sinfo_utl_spectrum_wavelength_shift(7)

VERSION

       sinfo_rec_mdark 3.0.0

AUTHOR

       Andrea Modigliani <Andrea.Modigliani@eso.org>

BUG REPORTS

       Please  report  any  problems  to Andrea.Modigliani@eso.org. Alternatively, you may send a
       report to the ESO User Support Department <usd-help@eso.org>.

LICENSE

       This file is part of the SINFONI Instrument  Pipeline  Copyright  (C)  2002,2003  European
       Southern Observatory

       This program is free software; you can redistribute it and/or modify it under the terms of
       the GNU General Public License as  published  by  the  Free  Software  Foundation;  either
       version 2 of the License, or (at your option) any later version.

       This  program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
       without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR  PURPOSE.
       See the GNU General Public License for more details.

       You should have received a copy of the GNU General Public License along with this program;
       if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite  330,  Boston,
       MA  02111-1307  USA