bionic (1) srf2fasta.1.gz

Provided by: staden-io-lib-utils_1.14.9-4_amd64 bug

NAME

       srf2fasta - Converts SRF files to fasta format

SYNOPSIS

       srf2fasta  [-C] srf_archive

DESCRIPTION

       srf2fasta extracts sequences from an SRF archive and writes them in fasta format to stdout.

OPTIONS

       -C     Masks out sequences tagged as bad quality.

EXAMPLES

       To extract only the good quality sequences from runX.srf into runX.fasta.

           srf2fasta -C runX.srf > runX.fasta

AUTHOR

       James Bonfield, Wellcome Trust Sanger Institute

                                                  September 19                                      srf2fasta(1)