bionic (4) modulefile.4.gz

Provided by: environment-modules_4.1.1-1_amd64 bug

NAME

       modulefile - files containing Tcl code for the Modules package

DESCRIPTION

       modulefiles  are  written  in  the Tool Command Language, Tcl(n) and are interpreted by the modulecmd.tcl
       program via the module(1) user interface. modulefiles can be loaded,  unloaded,  or  switched  on-the-fly
       while  the  user  is  working; and can be used to implement site policies regarding the access and use of
       applications.

       A modulefile begins with the magic cookie, '#%Module'. A version number may be placed after this  string.
       The version number is useful as the modulefile format may change. If a version number doesn't exist, then
       modulecmd.tcl will assume the modulefile is compatible with the latest version.  The  current  modulefile
       version is 1.0. Files without the magic cookie will not be interpreted by modulecmd.tcl.

       Each  modulefile  contains  the changes to a user's environment needed to access an application. Tcl is a
       simple programming language which permits modulefiles to  be  arbitrarily  complex,  depending  upon  the
       application's  and  the modulefile writer's needs. If support for extended tcl (tclX) has been configured
       for your installation of the Modules package, you may use all the extended  commands  provided  by  tclX,
       too.

       A  typical  modulefiles  is  a  simple bit of code that set or add entries to the PATH, MANPATH, or other
       environment variables. Tcl has conditional statements that are evaluated when the modulefile  is  loaded.
       This  is  very  effective  for  managing  path  or  environment  changes  due to different OS releases or
       architectures. The user environment information is encapsulated  into  a  single  modulefile  kept  in  a
       central  location.  The  same  modulefile  is  used  by  every  user  on any machine. So, from the user's
       perspective, starting an application is exactly the same irrespective of the machine or platform they are
       on.

       modulefiles  also hide the notion of different types of shells. From the user's perspective, changing the
       environment for one shell looks exactly the same as changing the environment for another shell.  This  is
       useful  for  new  or  novice  users and eliminates the need for statements such as "if you're using the C
       Shell do this ..., otherwise if you're using the Bourne shell do this ...". Announcing and accessing  new
       software  is  uniform and independent of the user's shell. From the modulefile writer's perspective, this
       means one set of information will take care of every type of shell.

MODULES SPECIFIC TCL COMMANDS

       The Modules Package uses commands which are extensions to the "standard"  Tool  Command  Language  Tcl(n)
       package.  Unless  otherwise  specified, the Module commands return the empty string. Some commands behave
       differently when a modulefile is loaded or unloaded. The command descriptions assume  the  modulefile  is
       being loaded.

       break
          This  is  not a Modules-specific command, it's actually part of Tcl, which has been overloaded similar
          to the continue and exit commands to have the effect of causing the module not to be listed as  loaded
          and not affect other modules being loaded concurrently. All non-environment commands within the module
          will be performed up to this point and processing will continue on to the next module on  the  command
          line. The break command will only have this effect if not used within a Tcl loop though.

          An  example:  Suppose  that  a  full  selection  of  modulefiles  are  needed  for  various  different
          architectures, but some of the modulefiles are not needed and the user should be alerted.  Having  the
          unnecessary  modulefile  be  a  link  to  the  following  notavail modulefile will perform the task as
          required.

              #%Module1.0
              ## notavail modulefile
              ##
              proc ModulesHelp { } {
                  puts stderr "This module does nothing but alert the user"
                  puts stderr "that the [module-info name] module is not available"
              }

              module-whatis "Notifies user that module is not available."
              set curMod [module-info name]
              if { [ module-info mode load ] } {
                  puts stderr "Note: '$curMod' is not available for [uname sysname]."
              }
              break

       chdir directory
          Set the current working directory to directory.

       continue
          This is not a modules specific command but another overloaded Tcl command and is similar to the  break
          or  exit  commands except the module will be listed as loaded as well as performing any environment or
          Tcl commands up to this point and then continuing on to the next  module  on  the  command  line.  The
          continue command will only have this effect if not used within a Tcl loop though.

       exit [N]
          This  is not a modules specific command but another overloaded Tcl command and is similar to the break
          or continue commands. However, this command will cause the immediate cessation of this module and  any
          additional  ones  on  the  command  line. This module and the subsequent modules will not be listed as
          loaded. No environment commands will be performed in the current module.

       setenv variable value
          Set environment variable to value. The setenv command will also change  the  process'  environment.  A
          reference  using  Tcl's  env  associative  array  will reference changes made with the setenv command.
          Changes made using Tcl's env associative array will NOT change the user's  environment  variable  like
          the  setenv  command. An environment change made this way will only affect the module parsing process.
          The setenv command is also useful for changing the environment prior to the exec  or  system  command.
          When  a  modulefile is unloaded, setenv becomes unsetenv. If the environment variable had been defined
          it will be overwritten while loading the modulefile. A subsequent unload will  unset  the  environment
          variable - the previous value cannot be restored! (Unless you handle it explicitly ... see below.)

       unsetenv variable [value]
          Unsets  environment variable. However, if there is an optional value, then when unloading a module, it
          will set variable to value. The unsetenv command changes the process' environment like setenv.

       append-path [-d C|--delim C|--delim=C] [--duplicates] variable value...
          See prepend-path.

       prepend-path [-d C|--delim C|--delim=C] [--duplicates] variable value...
          Append or prepend value to environment variable. The variable is a colon, or delimiter, separated list
          such as PATH=directory:directory:directory. The default delimiter is a colon ':', but an arbitrary one
          can be given by the --delim option. For example a space can be used instead (which  will  need  to  be
          handled in the Tcl specially by enclosing it in " " or { }). A space, however, can not be specified by
          the --delim=C form.

          A reference counter environment variable is also set to increase the number of times  value  has  been
          added  to  environment  variable.  This  reference  counter environment variable is named by suffixing
          variable by _modshare.

          When value is already defined in environement variable, it is not added again except  if  --duplicates
          option is set.

          If the variable is not set, it is created. When a modulefile is unloaded, append-path and prepend-path
          become remove-path.

          If value corresponds to the concatenation of multiple  elements  separated  by  colon,  or  delimiter,
          character, each element is treated separately.

       remove-path [-d C|--delim C|--delim=C] [--index] variable value...
          Remove value from the colon, or delimiter, separated list in variable. See prepend-path or append-path
          for further explanation of using an arbitrary delimiter. Every string between colons,  or  delimiters,
          in  variable  is  compared to value. If the two match, value is removed from variable if its reference
          counter is equal to 1 or unknown.

          When --index option is set, value refers to an index in variable list.  The string element pointed  by
          this index is set for removal.

          Reference  counter  of value in variable denotes the number of times value has been added to variable.
          This information is stored in environment variable_modshare. When  attempting  to  remove  value  from
          variable,  relative reference counter is checked and value is removed only if counter is equal to 1 or
          not defined. Elsewhere value is kept in variable and reference counter is decreased by 1.

          If value corresponds to the concatenation of multiple  elements  separated  by  colon,  or  delimiter,
          character, each element is treated separately.

       prereq modulefile...
          See conflict.

       conflict modulefile...
          prereq  and  conflict  control  whether or not the modulefile will be loaded. The prereq command lists
          modulefiles which must have been previously loaded before  the  current  modulefile  will  be  loaded.
          Similarly,  the  conflict  command  lists modulefiles which conflict with the current modulefile. If a
          list contains more than one modulefile, then each member of the list acts as a Boolean  OR  operation.
          Multiple  prereq  and  conflict  commands may be used to create a Boolean AND operation. If one of the
          requirements have not been satisfied, an error is reported and the current modulefile makes no changes
          to the user's environment.

          If  an  argument for prereq is a directory and any modulefile from the directory has been loaded, then
          the prerequisite is met. For example, specifying X11 as a prereq means that any version of X11, X11/R4
          or X11/R5, must be loaded before proceeding.

          If  an  argument  for  conflict  is  a directory and any other modulefile from that directory has been
          loaded, then a conflict will occur. For example, specifying X11 as a conflict  will  stop  X11/R4  and
          X11/R5 from being loaded at the same time.

       is-loaded [modulefile...]
          The  is-loaded command returns a true value if any of the listed modulefiles has been loaded or if any
          modulefile is loaded in case no argument is provided. If a list contains  more  than  one  modulefile,
          then  each  member acts as a boolean OR operation. If an argument for is-loaded is a directory and any
          modulefile from the directory has been loaded is-loaded would return a true value.

       is-saved [collection...]
          The is-saved command returns a true value if any of the listed collections exists or if any collection
          exists  in case no argument is provided. If a list contains more than one collection, then each member
          acts as a boolean OR operation.

          If MODULES_COLLECTION_TARGET is set, a suffix equivalent to the value of this variable is appended  to
          the  passed  collection  name.  In  case no collection argument is provided, a true value will only be
          returned if a collection matching currently set target exists.

       is-used [directory...]
          The is-used command returns a true value if  any  of  the  listed  directories  has  been  enabled  in
          MODULEPATH  or  if  any  directory is enabled in case no argument is provided. If a list contains more
          than one directory, then each member acts as a boolean OR operation.

       is-avail modulefile...
          The is-avail command returns a true  value  if  any  of  the  listed  modulefiles  exists  in  enabled
          MODULEPATH.  If  a  list  contains  more  than  one  modulefile, then each member acts as a boolean OR
          operation. If an argument for is-avail is a  directory  and  a  modulefile  exists  in  the  directory
          is-avail would return a true value.

       module [sub-command] [sub-command-args]
          Contains  the  same  sub-commands  as  described  in the module(1) man page in the Module Sub-Commands
          section. This command permits a modulefile to load or unload other modulefiles. No checks are made  to
          ensure that the modulefile does not try to load itself. Often it is useful to have a single modulefile
          that performs a number of module load commands. For example, if every user on the  system  requires  a
          basic  set  of  applications  loaded,  then  a core modulefile would contain the necessary module load
          commands.

       module-info option [info-args]
          Provide information about the modulecmd.tcl program's state. Some of the information  is  specific  to
          the  internals  of  modulecmd.tcl. option is the type of information to be provided, and info-args are
          any arguments needed.

          module-info type
              Returns either "C" or "Tcl" to indicate which module command is being  executed,  either  the  "C"
              version  or the Tcl-only version, to allow the modulefile writer to handle any differences between
              the two.

          module-info mode [modetype]
              Returns the current modulecmd.tcl's mode as a string if no modetype is given.

              Returns 1 if modulecmd.tcl's mode is modetype. modetype can  be:  load,  unload,  remove,  switch,
              display, help, test or whatis.

          module-info command [commandname]
              Returns the currently running modulecmd.tcl's command as a string if no commandname is given.

              Returns  1  if  modulecmd.tcl's  command is commandname. commandname can be: load, unload, reload,
              source, switch, display, avail, aliases, list, whatis, search, purge, restore, help or test.

          module-info name
              Return the name of the modulefile. This is not the full pathname for modulefile. See  the  Modules
              Variables section for information on the full pathname.

          module-info specified
              Return the name of the modulefile specified on the command line.

          module-info shell [shellname]
              Return  the  current  shell  under  which  modulecmd.tcl was invoked if no shellname is given. The
              current shell is the first parameter of modulecmd.tcl, which is  normally  hidden  by  the  module
              alias.

              If  a  shellname  is  given,  returns  1  if modulecmd.tcl's current shell is shellname, returns 0
              elsewhere. shellname can be: sh, bash, ksh, zsh, csh, tcsh, fish, tcl, perl, python,  ruby,  lisp,
              cmake, r.

          module-info shelltype [shelltypename]
              Return the family of the shell under which modulefile was invoked if no shelltypename is given. As
              of module-info shell this depends on the first parameter of modulecmd.tcl. The output  reflects  a
              shell type determining the shell syntax of the commands produced by modulecmd.tcl.

              If  a  shelltypename  is  given, returns 1 if modulecmd.tcl's current shell type is shelltypename,
              returns 0 elsewhere. shelltypename can be: sh, csh, fish, tcl, perl, python, ruby, lisp, cmake, r.

          module-info alias name
              Returns the full modulefile name to which the modulefile alias name is assigned

          module-info version modulefile
              Returns the physical module name and version of  the  passed  symbolic  version  modulefile.   The
              parameter  modulefile  might  either be a full qualified modulefile with name and version, another
              symbolic modulefile name or a modulefile alias.

          module-info symbols modulefile
              Returns a list of all  symbolic  versions  assigned  to  the  passed  modulefile.   The  parameter
              modulefile  might  either  be  a full qualified modulefile with name and version, another symbolic
              modulefile name or a modulefile alias.

          module-info loaded modulefile
              Returns the  names  of  currently  loaded  modules  matching  passed  modulefile.   The  parameter
              modulefile  might  either be a full qualified modulefile with name and version or just a directory
              which in case all loaded modulefiles from the directory will be returned.

       module-version modulefile version-name...
          Assigns the symbolic version-name to the modulefile. This command should  be  placed  in  one  of  the
          modulecmd.tcl rc files in order to provide shorthand invocations of frequently used modulefile names.

          The  special  version-name default specifies the default version to be used for module commands, if no
          specific version is given. This  replaces  the  definitions  made  in  the  .version  file  in  former
          modulecmd.tcl releases.

          The parameter modulefile may be either

          • a  fully  or  partially  qualified  modulefile  with name / version. If name is '.' then the current
            directory name is assumed to be the module name. (Use this for deep modulefile directories.)

          • a symbolic modulefile name

          • another modulefile alias

       module-alias name modulefile
          Assigns the modulefile to the alias name. This command should be placed in one of the modulecmd.tcl rc
          files in order to provide shorthand invocations of frequently used modulefile names.

          The parameter modulefile may be either

          • a fully qualified modulefile with name and version

          • a symbolic modulefile name

          • another modulefile alias

       module-virtual name modulefile
          Assigns  the modulefile to the virtual module name. This command should be placed in rc files in order
          to define virtual modules.

          A virtual module stands for a module name associated to a modulefile. The  modulefile  is  the  script
          interpreted  when  loading  or  unloading  the  virtual  module which appears or can be found with its
          virtual name.

          The parameter modulefile corresponds to the relative or absolute file location of a modulefile.

       module-whatis string
          Defines a string which is displayed in case of the invocation of the module whatis command. There  may
          be  more  than  one module-whatis line in a modulefile. This command takes no actions in case of load,
          display, etc. invocations of modulecmd.tcl.

          The string parameter has to be enclosed in double-quotes if there's  more  than  one  word  specified.
          Words are defined to be separated by whitespace characters (space, tab, cr).

       set-alias alias-name alias-string
          Sets  an  alias  or  function  with  the  name  alias-name  in  the  user's  environment to the string
          alias-string. For some shells, aliases are not  possible  and  the  command  has  no  effect.  When  a
          modulefile is unloaded, set-alias becomes unset-alias.

       unset-alias alias-name
          Unsets an alias with the name alias-name in the user's environment.

       system string
          Pass  string  to the Tcl built-in command exec(n). For the exec(n) call modulecmd.tcl redirects stdout
          to stderr since stdout would be parsed by the evaluating  shell.  The  exit  status  of  the  executed
          command is returned.

       uname field
          Provide lookup of system information. Most field information are retrieved from the tcl_platform array
          (see tclvars(n) man page). Uname will return the string "unknown" if information  is  unavailable  for
          the field.

          uname  will  invoke uname(1) command in order to get the operating system version and domainname(1) to
          figure out the name of the domain.

          field values are:

          • sysname: the operating system name

          • nodename: the hostname

          • domain: the name of the domain

          • release: the operating system release

          • version: the operating system version

          • machine: a standard name that identifies the system's hardware

       x-resource [resource-string|filename]
          Merge resources into the X11 resource database. The resources are used to control look and behavior of
          X11  applications.  The  command will attempt to read resources from filename. If the argument isn't a
          valid file name, then string will be interpreted as a resource. Either filename or resource-string  is
          then passed down to be xrdb(1) command.

          modulefiles  that  use  this  command, should in most cases contain one or more x-resource lines, each
          defining one X11 resource. The DISPLAY environment variable should be properly set and the X11  server
          should  be  accessible.  If x-resource can't manipulate the X11 resource database, the modulefile will
          exit with an error message.

          Examples:

          x-resource /u2/staff/leif/.xres/Ileaf
              The content of the Ileaf file is merged into the X11 resource database.

          x-resource [glob ~/.xres/ileaf]
              The Tcl glob function is used to have the modulefile read different resource files  for  different
              users.

          x-resource {Ileaf.popup.saveUnder: True}
              Merge the Ileaf resource into the X11 resource database.

MODULES VARIABLES

       The ModulesCurrentModulefile variable contains the full pathname of the modulefile being interpreted.

LOCATING MODULEFILES

       Every  directory  in MODULEPATH is searched to find the modulefile. A directory in MODULEPATH can have an
       arbitrary number of sub-directories. If the user names a modulefile to be  loaded  which  is  actually  a
       directory,  the  directory  is  opened and a search begins for an actual modulefile. First, modulecmd.tcl
       looks for a file with the name .modulerc in the directory. If this file  exists,  its  contents  will  be
       evaluated  as  if  it  was  a  modulefile  to  be  loaded. You may place module-version, module-alias and
       module-virtual commands inside this file.

       Additionally, before seeking for .modulerc files in the module directory, the  global  modulerc  file  is
       sourced,  too.  If  a  named  version  default  now  exists for the modulefile to be loaded, the assigned
       modulefile now will be sourced. Otherwise the file .version is looked up in the directory.

       If the .version file exists, it is opened and interpreted  as  Tcl  code  and  takes  precedence  over  a
       .modulerc  file  in  the  same directory. If the Tcl variable ModulesVersion is set by the .version file,
       modulecmd.tcl will use the name as if it specifies a modulefile in the directory. This  will  become  the
       default modulefile in this case.

       If  ModulesVersion is a directory, the search begins anew down that directory. If the name does not match
       any files located in the current directory, the search continues through  the  remaining  directories  in
       MODULEPATH.

       Every  .version and .modulerc file found is Tcl interpreted. The difference is that .version only applies
       to the current directory, and the .modulerc applies to the  current  directory  and  all  subdirectories.
       Changes made in these files will affect the subsequently interpreted modulefile.

       If  no default version may be figured out, then the highest numerically sorted modulefile, virtual module
       or module alias under the directory will be used. The dictionary comparison method of  the  lsort(n)  Tcl
       command is used to achieve this sort. If highest numerically sorted element is an alias, search continues
       on its modulefile target.

       For example, it is possible for a user to have a directory named X11 which  simply  contains  a  .version
       file specifying which version of X11 is to be loaded. Such a file would look like:

          #%Module1.0
          ##
          ##  The desired version of X11
          ##
          set ModulesVersion "R4"

       The equivalent .modulerc would look like:

          #%Module1.0
          ##
          ##  The desired version of X11
          ##
          module-version "./R4" default

       If  user  names  a  modulefile that cannot be found in the first modulepath directory, modulefile will be
       searched in next modulepath directory and so on until a matching modulefile  is  found.  If  search  goes
       through  a  module  alias or a symbolic version, this alias or symbol is resolved by first looking at the
       modulefiles in the modulepath where this alias or symbol is defined. If not found,  resolution  looks  at
       the other modulepaths in their definition order.

       When  locating modulefiles, if a .modulerc, a .version, a directory or a modulefile cannot be read during
       the search it is simply ignored with no error message produced. Visibility of  modulefiles  can  thus  be
       adapted  to  the  rights  the  user  has been granted. Exception is made when trying to directly access a
       directory or a modulefile. In this case, the access issue is returned as an error message.

       A modulefile whose name or element in its name starts  with  a  '.'  dot  is  considered  hidden.  Hidden
       modulefile  is  not  displayed  or taken into account except if it is explicitly named. By inheritance, a
       symbolic version-name assigned to a hidden  modulefile  is  displayed  or  taken  into  account  only  if
       explicitly named. Module alias targeting a hidden modulefile appears like any other module alias.

MODULEFILE SPECIFIC HELP

       Users  can  request  help  about  a specific modulefile through the module(1) command. The modulefile can
       print helpful information or start help oriented programs  by  defining  a  ModulesHelp  subroutine.  The
       subroutine will be called when the module help modulefile command is used.

MODULEFILE SPECIFIC TEST

       Users can request test of a specific modulefile through the module(1) command. The modulefile can perform
       some sanity checks on its definition or on its underlying programs by defining a ModulesTest  subroutine.
       The  subroutine  will  be  called  when the module test modulefile command is used. The subroutine should
       return 1 in case of success. If no or any other value is returned, test is considered failed.

MODULEFILE DISPLAY

       The module display modulefile command will detail all changes that will be made to the environment. After
       displaying  all  of  the  environment  changes modulecmd.tcl will call the ModulesDisplay subroutine. The
       ModulesDisplay subroutine is a good place to put additional descriptive information about the modulefile.

ENVIRONMENT

       MODULEPATH
          Path of directories containing modulefiles.

SEE ALSO

       module(1), Tcl(n), TclX(n), xrdb(1), exec(n), uname(1), domainname(1), tclvars(n), lsort(n)

NOTES

       Tcl was developed by John Ousterhout at the University of California at Berkeley.

       TclX was developed by Karl Lehenbauer and Mark Diekhans.

       1996-1999 John L. Furlani & Peter W. Osel, 1998-2017 R.K.Owen,  2002-2004  Mark  Lakata,  2004-2017  Kent
       Mein, 2016-2018 Xavier Delaruelle