NAME

       parse-examl  - transform an alignment file in relaxed phylip format into a binary file format that can be
       read by ExaML

SYNOPSIS

       parse-examl -s sequenceFileName -n outputFileName -m substitutionModel [-c] [-q] [-h]

OPTIONS

       -m Model of
              Nucleotide or Amino Acid Substitution:

              For Binary data use: BIN For DNA data use:    DNA For AA data use:     PROT

       -c     disable site pattern compression

       -q     Specify the file name which contains the assignment of models to alignment partitions for multiple
              models of substitution. For the syntax of this file please consult the manual.

       -h     Display this help message.

AUTHOR

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.