focal (3) Bio::DB::HTS::Target.3pm.gz

Provided by: libbio-db-hts-perl_3.01-3_amd64 bug

LICENSE
       Copyright [2015-2018] EMBL-European Bioinformatics Institute

       Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in
       compliance with the License.  You may obtain a copy of the License at

            http://www.apache.org/licenses/LICENSE-2.0

       Unless required by applicable law or agreed to in writing, software distributed under the License is
       distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
       See the License for the specific language governing permissions and limitations under the License.


NAME
       Bio::DB::HTS::Target -- Object representing the query portion of a BAM/SAM alignment in NATIVE alignment


SYNOPSIS
       This is identical to Bio::DB::HTS::Query, except that the dna, qscores and start and end positions are
       all given in the orientation in which the read was sequenced, not in the oreintation in which it was
       aligned.


AUTHOR
       Rishi Nag <rishi@ebi.ac.uk<gt>