NAME

       maker_wq  -  Run the Maker genome annotation tool using Work Queue to harness heterogenous
       resources

SYNOPSIS

       maker_wq [options] <maker_opts> <maker_bopts> <maker_exe>

DESCRIPTION

       maker_wq is a manager script to run the Maker genome annotation tool using Work  Queue  to
       enable  the  user to harness the heterogenous power of multiple systems simultaneously. It
       accepts all of the Maker inputs. The primary difference is that  the  MPI  code  has  been
       replaced with Work Queue components.

       maker_wq  expects  a  maker_wq_worker  in  the  path,  and  can  be  used from any working
       directory. All required input files are specified in the standard Maker control files just
       as in the standard Maker distribution.

OPTIONS

        -port <port>
              Specify the port on which to create the Work Queue

        -fa <fast_abort>
              Specify a fast abort multiplier

        -N <project>
              Specify a project name for utilizing shared workers

EXIT STATUS

       On success, returns zero.  On failure, returns non-zero.

ENVIRONMENT VARIABLES

EXAMPLES

       To run maker_wq, specify the same arguments as standard Maker:

               maker_wq maker_opts.ctl maker_bopts.ctl maker_exe.ctl > output

       This  will  begin  the  Maker run. All that is needed now is to submit workers that can be
       accessed by our manager.

COPYRIGHT

       The Cooperative Computing Tools are Copyright (C) 2005-2019 The University of Notre  Dame.
       This  software  is distributed under the GNU General Public License.  See the file COPYING
       for details.

SEE ALSO