NAME

       mia-2dmyoseries-dice - Evaluate the dice index between segmentations.

SYNOPSIS

       mia-2dmyoseries-dice -i <input> [options]

DESCRIPTION

       mia-2dmyoseries-dice This program is used to evaluate the per-frame dice index of segmented regions of an
       image with respect to the segmentation of a reference frame from the same series.

OPTIONS

              -i --input=(input, required); string
                     original segmentation set

              -k --skip=2
                     images to skip atthe bgin of the series

              -r --reference=20
                     reference image

   Help & Info
              -V --verbose=warning
                     verbosity  of  output,  print  messages  of  given  level  and higher priorities. Supported
                     priorities starting at lowest level are:

                        trace ‐ Function call trace
                        debug ‐ Debug output
                        info ‐ Low level messages
                        message ‐ Normal messages
                        warning ‐ Warnings
                        fail ‐ Report test failures
                        error ‐ Report errors
                        fatal ‐ Report only fatal errors

                 --copyright
                     print copyright information

              -h --help
                     print this help

              -? --usage
                     print a short help

                 --version
                     print the version number and exit

   Processing
                 --threads=-1
                     Maxiumum number of threads to use for processing,This number should be lower  or  equal  to
                     the number of logical processor cores in the machine. (-1: automatic estimation).

EXAMPLE

       Evaluate  the  dice  index  of  segmentation set segment.set with reference 30 and skipping the first two
       frames.

       mia-2dmyoseries-dice -i segment.set -r 30 -k 2

AUTHOR(s)

       Gert Wollny

COPYRIGHT

       This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain.  It comes  with   ABSOLUTELY
       NO  WARRANTY   and   you  may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3
       (or later). For more information run the program with the option '--copyright'.

USER COMMANDS                                        v2.4.7                              mia-2dmyoseries-dice(1)