Provided by: gridengine-common_8.1.9+dfsg-11build3_all 
NAME
sge_conf - Grid Engine configuration files
DESCRIPTION
sge_conf defines the global and local Grid Engine configurations and can be shown/modified by qconf(1)
using the -sconf/-mconf options. Only root or the cluster administrator may modify sge_conf.
At its initial start-up, sge_qmaster(8) checks to see if a valid Grid Engine configuration is available
at a well known location in the Grid Engine internal directory hierarchy. If so, it loads that
configuration information and proceeds. If not, sge_qmaster(8) writes a generic configuration containing
default values to that same location. The Grid Engine execution daemons sge_execd(8) upon start-up
retrieve their configuration from sge_qmaster(8).
The actual configuration for both sge_qmaster(8) and sge_execd(8) is a superposition of a global
configuration and a local configuration pertinent for the host on which a master or execution daemon
resides. If a local configuration is available, its entries overwrite the corresponding entries of the
global configuration. Note: The local configuration does not have to contain all valid configuration
entries, but only those which need to be modified against the global entries.
Note: Grid Engine allows backslashes (\) be used to escape newline characters. The backslash and the
newline are replaced with a space (" ") character before any interpretation.
FORMAT
The paragraphs that follow provide brief descriptions of the individual parameters that compose the
global and local configurations for a Grid Engine cluster:
execd_spool_dir
The execution daemon spool directory path. Again, a feasible spool directory requires read/write access
permission for root. The entry in the global configuration for this parameter can be overwritten by
execution host local configurations, i.e. each sge_execd(8) may have a private spool directory with a
different path, in which case it needs to provide read/write permission for the root account of the
corresponding execution host only.
Under execd_spool_dir a directory named corresponding to the unqualified hostname of the execution host
is opened and contains all information spooled to disk. Thus, it is possible for the execd_spool_dirs of
all execution hosts to physically reference the same directory path (the root access restrictions
mentioned above need to be met, however).
Changing the global execd_spool_dir parameter set at installation time is not supported in a running
system. If the change should still be done it is required to restart all affected execution daemons.
Please make sure running jobs have finished before doing so, otherwise running jobs will be lost.
The default location for the execution daemon spool directory is $SGE_ROOT/$SGE_CELL/spool.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
mailer
mailer is the absolute pathname to the electronic mail delivery agent on your system. An optional prefix
"user@" specifies the user under which this procedure is to be started; the default is root. The mailer
must accept the following syntax:
mailer -s <subject-of-mail-message> <recipient>
Each sge_execd(8) may use a private mail agent. Changing mailer will take immediate effect.
The default for mailer depends on the operating system of the host on which the Grid Engine master
installation was run. Common values are /bin/mail or /usr/bin/Mail. Note that since the mail is sent by
compute hosts, not the master, it may be necessary to take steps to route it appropriately, e.g. by using
a cluster head node as a "smart host" for the private network.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
xterm
xterm is the absolute pathname to the X Window System terminal emulator, xterm(1).
Changing xterm will take immediate effect.
The default for xterm is system-dependent.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
load_sensor
A comma-separated list of executable shell script paths or programs to be started by sge_execd(8) and to
be used in order to retrieve site-configurable load information (e.g. free space on a certain disk
partition).
Each sge_execd(8) may use a set of private load_sensor programs or scripts. Changing load_sensor will
take effect after two load report intervals (see load_report_time). A load sensor will be restarted
automatically if the file modification time of the load sensor executable changes.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
In addition to the load sensors configured via load_sensor, sge_exec(8) searches for an executable file
named qloadsensor in the execution host's Grid Engine binary directory path. If such a file is found, it
is treated like the configurable load sensors defined in load_sensor. This facility is intended for pre-
installing a default load sensor. See sge_execd(8) for information on writing load sensors.
prolog
The path of an executable, with optional arguments, that is started before execution of Grid Engine jobs
with the same environment setting as that for the Grid Engine jobs to be started afterwards (see
qsub(1)). The prolog command is started directly, not in a shell. An optional prefix "user@" specifies
the user under which this procedure is to be started. In that case see the SECURITY section below
concerning security issues running as a privileged user. The procedure's standard output and the error
output stream are written to the same file as used for the standard output and error output of each job.
This procedure is intended as a means for the Grid Engine administrator to automate the execution of
general site-specific tasks, like the preparation of temporary file systems, with a need for the same
context information as the job. For a parallel job, only a single instance of the prolog is run, on the
master node. Each sge_execd(8) may use a private prolog. Correspondingly, the global or execution host
local configuration can be overwritten by the queue configuration (see queue_conf(5)). Changing prolog
will take immediate effect.
The default for prolog is the special value NONE, which prevents execution of a prolog.
The following special variables, expanded at runtime, can be used (besides any other strings which have
to be interpreted by the procedure) to compose a command line:
$host The name of the host on which the prolog or epilog procedures are started.
$ja_task_id
The array job task index (0 if not an array job).
$job_owner
The user name of the job owner.
$job_id
Grid Engine's unique job identification number.
$job_name
The name of the job.
$processors
The processors string as contained in the queue configuration (see queue_conf(5)) of the master
queue (the queue in which the prolog and epilog procedures are started).
$queue The cluster queue name of the master queue instance, i.e. the cluster queue in which the prolog
and epilog procedures are started.
$stdin_path
The pathname of the stdin file. This is always /dev/null for prolog, pe_start, pe_stop and epilog.
It is the pathname of the stdin file for the job in the job script. When delegated file staging is
enabled, this path is set to $fs_stdin_tmp_path. When delegated file staging is not enabled, it is
the stdin pathname given via DRMAA or qsub.
$stdout_path
$stderr_path
The pathname of the stdout/stderr file. This always points to the output/error file. When
delegated file staging is enabled, this path is set to $fs_stdout_tmp_path/$fs_stderr_tmp_path.
When delegated file staging is not enabled, it is the stdout/stderr pathname given via DRMAA or
qsub.
$merge_stderr
If this flag is 1, stdout and stderr are merged in one file, the stdout file. Otherwise (the
default), no merging is done. Merging of stderr and stdout can be requested via the DRMAA job
template attribute 'drmaa_join_files' (see drmaa_attributes(3)) or the qsub parameter '-j y' (see
qsub(1)).
$fs_stdin_host
When delegated file staging is requested for the stdin file, this is the name of the host where
the stdin file has to be copied from before the job is started.
$fs_stdout_host
$fs_stderr_host
When delegated file staging is requested for the stdout/stderr file, this is the name of the host
where the stdout/stderr file has to be copied to after the job has run.
$fs_stdin_path
When delegated file staging is requested for the stdin file, this is the pathname of the stdin
file on the host $fs_stdin_host.
$fs_stdout_path
$fs_stderr_path
When delegated file staging is requested for the stdout/stderr file, this is the pathname of the
stdout/stderr file on the host $fs_stdout_host/$fs_stderr_host.
$fs_stdin_tmp_path
When delegated file staging is requested for the stdin file, this is the destination pathname of
the stdin file on the execution host. The prolog must copy the stdin file from
$fs_stdin_host:$fs_stdin_path to localhost:$fs_stdin_tmp_path to establish delegated file staging
of the stdin file.
$fs_stdout_tmp_path
$fs_stderr_tmp_path
When delegated file staging is requested for the stdout/stderr file, this is the source pathname
of the stdout/stderr file on the execution host. The epilog must copy the stdout file from
localhost:$fs_stdout_tmp_path to $fs_stdout_host:$fs_stdout_path (the stderr file from
localhost:$fs_stderr_tmp_path to $fs_stderr_host:$fs_stderr_path) to establish delegated file
staging of the stdout/stderr file.
$fs_stdin_file_staging
$fs_stdout_file_staging
$fs_stderr_file_staging
When delegated file staging is requested for the stdin/stdout/stderr file, the flag is set to "1",
otherwise it is set to "0" (see in delegated_file_staging how to enable delegated file staging).
These three flags correspond to the DRMAA job template attribute 'drmaa_transfer_files' (see
drmaa_attributes(3)).
If the prolog is written in shell script, the usual care must be exercised, e.g. when expanding such
values from the command line or the environment which are user-supplied. In particular, note that the
job name could be of the form "; evil doings;". Also, use absolute path names for commands if inheriting
the user's environment.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
See sge_shepherd(8) for the significance of exit codes returned by the prolog.
epilog
The path of an executable, with optional argument, that is started after execution of Grid Engine jobs
with the same environment setting as that for the Grid Engine job that has just completed (see qsub(1)),
with the addition of the variable named SGE_JOBEXIT_STAT which holds the exit status of the job. The
epilog command is started directly, not in a shell. An optional prefix "user@" specifies the user under
which this procedure is to be started. In that case see the SECURITY section below concerning security
issues running as a privileged user. The procedure's standard output and the error output stream are
written to the same file used for the standard output and error output of each job.
The same special variables can be used to compose a command line as for the prolog.
This procedure is intended as a means for the Grid Engine administrator to automate the execution of
general site-specific tasks, like the cleaning up of temporary file systems with the need for the same
context information as the job. For a parallel job, only a single instance of the epilog is run, on the
master node. Each sge_execd(8) may use a private epilog. Correspondingly, the global or execution host
local configurations can be overwritten by the queue configuration (see queue_conf(5)). Changing epilog
will take immediate effect.
The default for epilog is the special value NONE, which prevents execution of an epilog. The same
special variables as for prolog can be used to constitute a command line.
The same considerations (above) apply as for a prolog when an epilog is written in shell script.
See sge_shepherd(8) for the significance of exit codes returned by the epilog.
shell_start_mode
Note: Deprecated, may be removed in future release.
This parameter defines the mechanisms which are used to actually invoke the job scripts on the execution
hosts. The following values are recognized:
unix_behavior
If a user starts a job shell script under UNIX interactively by invoking it just with the script
name the operating system's executable loader uses the information provided in a comment such as
`#!/bin/csh' in the first line of the script to detect which command interpreter to start to
interpret the script. This mechanism is used by Grid Engine when starting jobs if unix_behavior is
defined as shell_start_mode.
posix_compliant
POSIX does not consider first script line comments such a `#!/bin/csh' as significant. The POSIX
standard for batch queueing systems (P1003.2d) therefore requires a compliant queueing system to
ignore such lines, but to use user-specified or configured default command interpreters instead.
Thus, if shell_start_mode is set to posix_compliant Grid Engine will either use the command
interpreter indicated by the -S option of the qsub(1) command or the shell parameter of the queue
to be used (see queue_conf(5) for details).
script_from_stdin
Setting the shell_start_mode parameter either to posix_compliant or unix_behavior requires you to
set the umask in use for sge_execd(8) such that every user has read access to the active_jobs
directory in the spool directory of the corresponding execution daemon. In case you have prolog
and epilog scripts configured, they also need to be readable by any user who may execute jobs.
If this violates your site's security policies you may want to set shell_start_mode to
script_from_stdin. This will force Grid Engine to open the job script as well as the epilog and
prolog scripts for reading into STDIN as root (if sge_execd(8) was started as root) before
changing to the job owner's user account. The script is then fed into the STDIN stream of the
command interpreter indicated by the -S option of the qsub(1) command or the shell parameter of
the queue to be used (see queue_conf(5) for details).
Thus setting shell_start_mode to script_from_stdin also implies posix_compliant behavior. Note,
however, that feeding scripts into the STDIN stream of a command interpreter may cause trouble if
commands like rsh(1) are invoked inside a job script as they also process the STDIN stream of the
command interpreter. These problems can usually be resolved by redirecting the STDIN channel of
those commands to come from /dev/null (e.g. rsh host date < /dev/null). Note also, that any
command-line options associated with the job are passed to the executing shell. The shell will
only forward them to the job if they are not recognized as valid shell options.
Changes to shell_start_mode will take immediate effect. The default for shell_start_mode is
posix_compliant.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
login_shells
UNIX command interpreters like the Bourne-Shell (see sh(1)) or the C-Shell (see csh(1)) can be used by
Grid Engine to start job scripts. The command interpreters can either be started as login-shells (i.e.
all system and user default resource files like .login or .profile will be executed when the command
interpreter is started, and the environment for the job will be set up as if the user has just logged in)
or just for command execution (i.e. only shell-specific resource files like .cshrc will be executed and a
minimal default environment is set up by Grid Engine - see qsub(1)). The parameter login_shells contains
a comma-separated list of the executable names of the command interpreters to be started as login shells.
Shells in this list are only started as login shells if the parameter shell_start_mode (see above) is set
to posix_compliant.
Changes to login_shells will take immediate effect. The default for login_shells is
sh,bash,csh,tcsh,ksh.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
min_uid
min_uid places a lower bound on user IDs that may use the cluster. Users whose user ID (as returned by
getpwnam(3)) is less than min_uid will not be allowed to run jobs on the cluster.
Changes to min_uid will take immediate effect. The default is 0 but, if CSP or MUNGE security is not in
use, the installation script sets it to 100 to prevent unauthorized access by root or system accounts.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
min_gid
This parameter sets the lower bound on group IDs that may use the cluster. Users whose default group ID
(as returned by getpwnam(3)) is less than min_gid will not be allowed to run jobs on the cluster.
Changes to min_gid will take immediate effect. The default is 0 but, if CSP security is not in use, the
installation script sets it to 100 to prevent unauthorized access by root or system accounts.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
user_lists
The user_lists parameter contains a comma-separated list of user access lists as described in
access_list(5). Each user contained in at least one of the access lists has access to the cluster. If
the user_lists parameter is set to NONE (the default) any user has access if not explicitly excluded via
the xuser_lists parameter described below. If a user is contained both in an access list xuser_lists and
user_lists, the user is denied access to the cluster.
Changes to user_lists will take immediate effect.
This value is a global configuration parameter insofar as it restricts access to the whole cluster, but
the execution host local configuration may define a value to restrict access to that host further.
xuser_lists
The xuser_lists parameter contains a comma-separated list of user access lists as described in
access_list(5). Each user contained in at least one of the access lists is denied access to the cluster.
If the xuser_lists parameter is set to NONE (the default) any user has access. If a user is contained
both in an access list in xuser_lists and user_lists (see above) the user is denied access to the
cluster.
Changes to xuser_lists will take immediate effect.
This value is a global configuration parameter insofar as it restricts access to the whole cluster, but
the execution host local configuration may define a value to restrict access to that host further.
administrator_mail
administrator_mail specifies a comma-separated list of the electronic mail address(es) of the cluster
administrator(s) to whom internally-generated problem reports are sent. The mail address format depends
on your electronic mail system and how it is configured; consult your system's configuration guide for
more information.
Changing administrator_mail takes immediate effect. The default for administrator_mail is an empty mail
list.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
projects
The projects list contains all projects which are granted access to Grid Engine. Users not belonging to
one of these projects cannot submit jobs. If users belong to projects in the projects list and the
xprojects list (see below), they also cannot submit jobs.
Changing projects takes immediate effect. The default for projects is none.
While globally-configured projects affect job submission, projects configured for queues or hosts affect
job execution in the appropriate context.
xprojects
The xprojects list contains all projects that are denied access to Grid Engine. Users belonging to one of
these projects cannot use Grid Engine. If users belong to projects in the projects list (see above) and
the xprojects list, they also cannot use the system.
Changing xprojects takes immediate effect. The default for xprojects is none.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
load_report_time
System load is reported periodically by the execution daemons to sge_qmaster(8). The parameter
load_report_time defines the time interval between load reports.
Each sge_execd(8) may use a different load report time. Changing load_report_time will take immediate
effect.
Note: Be careful when modifying load_report_time. Reporting load too frequently might block
sge_qmaster(8) especially if the number of execution hosts is large. Moreover, since the system load
typically increases and decreases smoothly, frequent load reports hardly offer any benefit.
The default for load_report_time is 40 seconds.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
reschedule_unknown
Determines whether jobs on hosts in an unknown state are rescheduled, and thus sent to other hosts. Hosts
are registered as unknown if sge_master(8) cannot establish contact to the sge_execd(8) on those hosts
(see max_unheard). Likely reasons are a breakdown of the host or a breakdown of the network connection
in between, but also sge_execd(8) may not be executing on such hosts.
In any case, Grid Engine can reschedule jobs running on such hosts to another system. reschedule_unknown
controls the time which Grid Engine will wait before jobs are rescheduled after a host became unknown.
The time format specification is hh:mm:ss. If the special value 00:00:00 is set, then jobs will not be
rescheduled from this host.
Rescheduling is only initiated for jobs which have activated the rerun flag (see the -r y option of
qsub(1) and the rerun option of queue_conf(5)). Parallel jobs are only rescheduled if the host on which
their master task executes is in unknown state. The behavior of reschedule_unknown for parallel jobs and
for jobs without the rerun flag set can be adjusted using the qmaster_params settings
ENABLE_RESCHEDULE_KILL and ENABLE_RESCHEDULE_SLAVE.
Checkpointing jobs will only be rescheduled when the when option of the corresponding checkpointing
environment contains an appropriate flag. (see checkpoint(5)). Interactive jobs (see qsh(1), qrsh(1),
qtcsh(1)) are not rescheduled.
The default for reschedule_unknown is 00:00:00
The global configuration entry for this value may be overwritten by the execution host local
configuration.
max_unheard
If sge_qmaster(8) could not contact, or was not contacted by, the execution daemon of a host for
max_unheard seconds, all queues residing on that particular host are set to status unknown.
sge_qmaster(8), at least, should be contacted by the execution daemons in order to get the load reports.
Thus, max_unheard should be greater than the load_report_time (see above).
Changing max_unheard takes immediate effect. The default for max_unheard is 5 minutes.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
loglevel
This parameter specifies the level of detail that Grid Engine components such as sge_qmaster(8) or
sge_execd(8) use to produce informative, warning or error messages which are logged to the messages files
in the master and execution daemon spool directories (see the description of the execd_spool_dir
parameter above). The following message levels are available:
log_err
All error events recognized are logged.
log_warning
All error events recognized, and all detected signs of potentially erroneous behavior, are logged.
log_info
All error events recognized, all detected signs of potentially erroneous behavior, and a variety
of informative messages are logged.
Changing loglevel will take immediate effect.
The default for loglevel is log_warning.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
max_aj_instances
This parameter defines the maximum number of array tasks to be scheduled to run simultaneously per array
job. An instance of an array task will be created within the master daemon when it gets a start order
from the scheduler. The instance will be destroyed when the array task finishes. Thus the parameter
provides control mainly over the memory consumption of array jobs in the master daemon. It is most useful
for very large clusters and very large array jobs. The default for this parameter is 2000. The value 0
will deactivate this limit and will allow the scheduler to start as many array job tasks as suitable
resources are available in the cluster.
Changing max_aj_instances will take immediate effect.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
max_aj_tasks
This parameter defines the maximum number of array job tasks within an array job. sge_qmaster(8) will
reject all array job submissions which request more than max_aj_tasks array job tasks. The default for
this parameter is 75000. The value 0 will deactivate this limit.
Changing max_aj_tasks will take immediate effect.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
max_u_jobs
The number of active (not finished) jobs which each Grid Engine user can have in the system
simultaneously is controlled by this parameter. A value greater than 0 defines the limit. The default
value 0 means "unlimited". If the max_u_jobs limit is exceeded by a job submission then the submission
command exits with exit status 25 and an appropriate error message.
Changing max_u_jobs will take immediate effect.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
max_jobs
The number of active (not finished) jobs simultaneously allowed in Grid Engine is controlled by this
parameter. A value greater than 0 defines the limit. The default value 0 means "unlimited". If the
max_jobs limit is exceeded by a job submission then the submission command exits with exit status 25 and
an appropriate error message.
Changing max_jobs will take immediate effect.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
max_advance_reservations
The number of active (not finished) Advance Reservations simultaneously allowed in Grid Engine is
controlled by this parameter. A value greater than 0 defines the limit. The default value 0 means
"unlimited". If the max_advance_reservations limit is exceeded by an Advance Reservation request then the
submission command exits with exit status 25 and an appropriate error message.
Changing max_advance_reservations will take immediate effect.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
enforce_project
If set to true, users are required to request a project whenever submitting a job. See the -P option to
qsub(1) for details.
Changing enforce_project will take immediate effect. The default for enforce_project is false.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
enforce_user
If set to true, a user(5) must exist to allow for job submission. Jobs are rejected if no corresponding
user exists.
If set to auto, a user(5) object for the submitting user will automatically be created during job
submission, if one does not already exist. The auto_user_oticket, auto_user_fshare,
auto_user_default_project, and auto_user_delete_time configuration parameters will be used as default
attributes of the new user(5) object.
Changing enforce_user will take immediate effect. The default for enforce_user is auto.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
auto_user_oticket
The number of override tickets to assign to automatically created user(5) objects. User objects are
created automatically if the enforce_user attribute is set to auto.
Changing auto_user_oticket will affect any newly created user objects, but will not change user objects
created in the past.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
auto_user_fshare
The number of functional shares to assign to automatically created user(5) objects. User objects are
created automatically if the enforce_user attribute is set to auto.
Changing auto_user_fshare will affect any newly created user objects, but will not change user objects
created in the past.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
auto_user_default_project
The default project to assign to automatically created user(5) objects. User objects are created
automatically if the enforce_user attribute is set to auto.
Changing auto_user_default_project will affect any newly created user objects, but will not change user
objects created in the past.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
auto_user_delete_time
The number of seconds of inactivity after which automatically created user(5) objects will be deleted.
User objects are created automatically if the enforce_user attribute is set to auto. If the user has no
active or pending jobs for the specified amount of time, the object will automatically be deleted. A
value of 0 can be used to indicate that the automatically created user object is permanent and should not
be automatically deleted.
Changing auto_user_delete_time will affect the deletion time for all users with active jobs.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
set_token_cmd
NB. If the qmaster spool area is world-readable for non-admin users, you must take steps to encrypt the
credentials, since they are stored there after job submission.
Set_token_cmd points to a command which sets and extends AFS tokens for Grid Engine jobs. It is run by
sge_coshepherd(8). It expects two command line parameters:
<set_token_cmd> <user> <token_extend_after_seconds>
It reads the token from STDIN, extends its expiration time, and re-sets the token. As a shell script
this command will call the programs:
- SetToken
- forge
which are provided by your distributor as source code. The script looks as follows:
--------------------------------
#!/bin/sh
# set_token_cmd
forge -u $1 -t $2 | SetToken
--------------------------------
Since it is necessary for forge to read the secret AFS server key, a site might wish to replace the
set_token_cmd script by a command, which connects to a custom daemon at the AFS server. The token must be
forged at the AFS server and returned to the local machine, where SetToken is executed.
Changing set_token_cmd will take immediate effect. The default for set_token_cmd is none.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
pag_cmd
The path to your pagsh is specified via this parameter. The sge_shepherd(8) process and the job run in a
pagsh. Please ask your AFS administrator for details.
Changing pag_cmd will take immediate effect. The default for pag_cmd is none.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
token_extend_time
The token_extend_time is the time period for which AFS tokens are periodically extended. Grid Engine will
call the token extension 30 minutes before the tokens expire until jobs have finished and the
corresponding tokens are no longer required.
Changing token_extend_time will take immediate effect. The default for token_extend_time is 24:0:0, i.e.
24 hours.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
shepherd_cmd
Alternative path to the shepherd_cmd binary. Typically used to call the shepherd binary by a wrapper
script or command. If used in production, this must take care to handle signals the way the shepherd
would or, for instance, jobs will not be killed correctly.
Changing shepherd_cmd will take immediate effect. The default for shepherd_cmd is none.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
gid_range
The gid_range is a comma-separated list of range expressions of the form m-n, where m and n are integer
numbers greater than 99, and m is an abbreviation for m-m. These numbers are used in sge_execd(8) to
identify processes belonging to the same job.
Each sge_execd(8) may use a separate set of group ids for this purpose. All numbers in the group id
range have to be unused supplementary group ids on the system, where the sge_execd(8) is started.
Changing gid_range will take immediate effect. There is no default for gid_range. The administrator will
have to assign a value for gid_range during installation of Grid Engine.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
qmaster_params
A list of additional parameters can be passed to the Grid Engine qmaster. The following values are
recognized:
ENABLE_ENFORCE_MASTER_LIMIT
If this parameter is set then the s_rt, h_rt limits of a running job are tested and acted on by
the sge_qmaster(8) when the sge_execd(8) where the job was run is in an unknown state.
After the s_rt or h_rt limit of a job is expired, the master daemon will wait additional time
defined by DURATION_OFFSET (see sched_conf(5)). If the execution daemon still cannot be contacted
when this additional time is elapsed, then the master daemon will force the deletion of the job
(see -f of qdel(1)).
For jobs which will be deleted that way, an accounting record will be created. For usage, the
record will contain the last reported online value when the execution daemon could contact
qmaster. The failed state in the record will be set to 37 to indicate that the job was terminated
by a limit enforced by the master daemon.
After the restart of sge_qmaster(8) the limit enforcement will be triggered after twice the
biggest load_report_interval interval defined in sge_conf(5) has elapsed. This will give the
execution daemons enough time to re-register with the master daemon.
ENABLE_FORCED_QDEL_IF_UNKNOWN
If this parameter is set then a deletion request for a job is automatically interpreted as a
forced deletion request (see -f of qdel(1)) if the host where the job is running is in an unknown
state.
ENABLE_FORCED_QDEL
If this parameter is set, non-administrative users can force deletion of their own jobs via the -f
option of qdel(1). Without this parameter, forced deletion of jobs is only allowed by the Grid
Engine manager or operator.
Note: Forced deletion for jobs is executed differently, depending on whether users are Grid Engine
administrators or not. In the case of administrative users, the jobs are removed from the internal
database of Grid Engine immediately. For regular users, the equivalent of a normal qdel(1) is
executed first, and deletion is forced only if the normal cancellation was unsuccessful.
FORBID_RESCHEDULE
If this parameter is set, re-queueing of jobs cannot be initiated by the job script which is under
control of the user. Without this parameter, jobs returning the value 99 are rescheduled. This can
be used to cause the job to be restarted on a different machine, for instance if there are not
enough resources on the current one.
FORBID_APPERROR
If this parameter is set, the application cannot set itself to the error state. Without this
parameter jobs returning the value 100 are set to the error state (and therefore can be manually
rescheduled by clearing the error state). This can be used to set the job to the error state when
a starting condition of the application is not fulfilled before the application itself has been
started, or when a clean up procedure (e.g. in the epilog) decides that it is necessary to run the
job again. To do so, return 100 in the prolog, pe_start, job script, pe_stop or epilog script.
DISABLE_AUTO_RESCHEDULING
Note: Deprecated, may be removed in future release.
If set to "true" or "1", the reschedule_unknown parameter is not taken into account.
ENABLE_RESCHEDULE_KILL
If set to "true" or "1", the reschedule_unknown parameter affects also jobs which have the rerun
flag not activated (see the -r y option of qsub(1) and the rerun option of queue_conf(5)), but
they are just finished as they can't be rescheduled.
ENABLE_RESCHEDULE_SLAVE
If set to "true" or "1" Grid Engine triggers job rescheduling also when the host where the slave
tasks of a parallel job executes is in unknown state, if the reschedule_unknown parameter is
activated.
MAX_DYN_EC
Sets the max number of dynamic event clients (as used by qsub -sync y and by Grid Engine DRMAA API
library sessions). The default is 1000. The number of dynamic event clients should not be bigger
than half of the number of file descriptors the system has. The number of file descriptors are
shared among the connections to all exec hosts, all event clients, and file handles that the
qmaster needs.
MONITOR_TIME
Specifies the time interval when the monitoring information should be printed. The monitoring is
disabled by default and can be enabled by specifying an interval. The monitoring is per-thread
and is written to the messages file or displayed by qping(1) with option -f. Example:
MONITOR_TIME=0:0:10 generates and prints the monitoring information approximately every 10
seconds. The specified time is a guideline only and not a fixed interval. The interval that is
actually used is printed. In this example, the interval could be anything between 9 seconds and
20 seconds.
LOG_MONITOR_MESSAGE
Monitoring information is logged into the messages files by default. This information can be
accessed via by qping(1). If monitoring is always enabled, the messages files can become quite
large. This switch disables logging into the messages files, making qping -f the only source of
monitoring data.
Profiling provides the user with the possibility to get system measurements. This can be useful for
debugging or optimization of the system. The profiling output will be done within the messages file.
PROF_SIGNAL
Enables profiling for the qmaster signal thread (e.g. PROF_SIGNAL=true).
PROF_WORKER
Enables profiling for the qmaster worker threads (e.g. PROF_WORKER=true).
PROF_LISTENER
Enables profiling for the qmaster listener threads (e.g. PROF_LISTENER=true).
PROF_DELIVER
Enables profiling for the qmaster event deliver thread (e.g. PROF_DELIVER=true).
PROF_TEVENT
Enables the profiling for the qmaster timed event thread (e.g. PROF_TEVENT=true).
PROF_SCHEDULER
Enables profiling for the qmaster scheduler thread (e.g. PROF_SCHEDULER=true).
Please note that the CPU utime and stime values contained in the profiling output are not per-thread CPU
times. These CPU usage statistics are per-process statistics. So the printed profiling values for CPU
mean "CPU time consumed by sge_qmaster (all threads) while the reported profiling level was active".
STREE_SPOOL_INTERVAL
Sets the time interval for spooling the sharetree usage. The default is set to 00:04:00. The
setting accepts colon-separated string or seconds. There is no setting to turn the sharetree
spooling off. (e.g. STREE_SPOOL_INTERVAL=00:02:00)
MAX_JOB_DELETION_TIME
Sets the value of how long the qmaster will spend deleting jobs. After this time, the qmaster will
continue with other tasks and schedule the deletion of remaining jobs at a later time. The default
value is 3 seconds, and will be used if no value is entered. The range of valid values is > 0 and
<= 5. (e.g. MAX_JOB_DELETION_TIME=1)
gdi_timeout
Sets how long the communication will wait for GDI send/receive operations. (GDI is the Grid
Engine Database Interface for interacting with objects managed by the qmaster.) The default value
is set to 60 seconds. After this time, the communication library will retry, if "gdi_retries" is
configured, receiving the GDI request. If not configured the communication will return with a "gdi
receive failure" (e.g. gdi_timeout=120 will set the timeout time to 120 sec). Configuring no
gdi_timeout value, the value defaults to 60 sec.
gdi_retries
Sets how often the GDI receive call will be repeated until the GDI receive error appears. The
default is set to 0. In this case the call will be done 1 time with no retry. Setting the value
to -1 the call will be done permanently. In combination with the gdi_timeout parameter it is
possible to configure a system with, e.g. slow NFS, to make sure that all jobs will be submitted.
(E.g. gdi_retries=4.)
cl_ping
Turns on/off a communication library ping. This parameter will create additional debug output.
This output shows information about the error messages which are returned by communication and it
will give information about the application status of the qmaster. For example, if it's unclear
what's the reason for gdi timeouts, this may show you some useful messages. The default value is
false (off) (i.e. cl_ping=false).
SCHEDULER_TIMEOUT
Setting this parameter allows the scheduler GDI event acknowledge timeout to be manually
configured to a specific value. Currently the default value is 10 minutes with the default
scheduler configuration and limited between 600 and 1200 seconds. Value is limited only in case
of default value. The default value depends on the current scheduler configuration. The
SCHEDULER_TIMEOUT value is specified in seconds.
jsv_timeout
This parameter measures the response time of the server JSV. In the event that the response time
of the JSV is longer than the timeout value specified, this will cause the JSV to be re-started.
The default value for the timeout is 10 seconds and if modified, must be greater than 0. If the
timeout is reached, the JSV will only try to re-start once; if the timeout is reached again, an
error will occur.
jsv_threshold
The threshold of a JSV is measured as the time it takes to perform a server job verification. If
this value is greater than the user-defined value, it will cause logging to appear in the qmaster
messages file at the INFO level. By setting this value to 0, all jobs will be logged in the
qmaster messages file. This value is specified in milliseconds and has a default value of 5000.
OLD_RESCHEDULE_BEHAVIOR
Beginning with version 8.0.0 of Grid Engine the scheduling behavior changed for jobs that are
rescheduled by users. Rescheduled jobs will not be put at the beginning of the pending job list
anymore. The submit time of those jobs is set to the end time of the previous run. Due to that,
those rescheduled jobs will be appended to the pending job list as if a new job had been
submitted. To achieve the old behaviour, set the parameter OLD_RESCHEDULE_BEHAVIOR. Please note
that this parameter is deprecated, so it might be removed with the next minor release.
OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB
Beginning with version 8.0.0 of Grid Engine the scheduling behavior changed for array job tasks
that are rescheduled by users. As soon as an array job task gets rescheduled, all remaining
pending tasks of that job will be put at the end of the pending job list. To achieve the old
scheduling behaviour set the parameter OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB. Please note that this
parameter is deprecated, so it might be removed with the next minor release.
SIMULATE_EXECDS
Bypass execd communication in qmaster for (e.g. for throughput tests with fake hosts). "Unknown"
queue states are suppressed, but load_thresholds=none must be used to avoid queues going into an
alarm state since load values are not simulated. Submitted jobs are dispatched, and act as if
they are run for a time determined by the job's first argument, after 3s spent in the
"transferring" state. I.e. there is a simulated 10s runtime for a command such as
qsub -b y sleep 10
In this condition, job deletion works, but at least interactive jobs, tightly-integrated parallel
ones, and job suspension don't. The execution hosts configured need not exist, but must have
resolvable network names.
NO_AUTHENTICATION
Don't do authentication when GSSAPI security is enabled. This, and the following parameter,
determine the GSS global configuration, which can be overridden with the execd_params of the
global or host-specific configuration.
NO_SECURITY
Don't store and forward credentials if GSSAPI security is enabled.
ENABLE_MTRACE
If GNU malloc is in use (rather then jemalloc, which is usually used on GNU/Linux) enable the
facility for recording all memory allocation/deallocation. Requires MALLOC_TRACE to be set in the
environment (see mtrace(3)).
__TEST_SLEEP_AFTER_REQUEST
Used by the test suite to block the worker thread for five seconds after handling a request to
ensure another worker thread will handle a subsequent request.
print_malloc_info
Allow monitoring malloc(3) statistics if Grid Engine is built to use the jemalloc((3)) allocator.
The information is usually obtained with the -info option of qping(1), but is generated by the
daemons and can't be controlled by the client. The default is false since the output is verbose
and might confuse programs parsing the traditional format. The parameter can also be set in
execd_params and affects both qmaster and execd daemons.
Changing qmaster_params will take immediate effect, except that gdi_timeout, gdi_retries, and cl_ping
will take effect only for new connections. The default for qmaster_params is none.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
execd_params
This is used for passing additional parameters to the Grid Engine execution daemon. The following values
are recognized:
ACCT_RESERVED_USAGE
If this parameter is set to true, the usage of "reserved" (allocated) resources is reported in the
accounting entries cpu, mem, and maxvmem instead of the measured usage. The live usage values
reported by qstat(1) are affected similarly. This means that the "wall clock" time (end-start) is
reported instead of CPU time, memory usage is memory allocation times wall clock time (which is
only computable if the job requests h_vmem or s_vmem), and maxvmem is the requested h_vmem or
s_vmem; the same scaling by slots is done as without this option.
Note that both the wall clock and CPU times are normally available (see accounting(5)), so this
option loses information, and "reserved" here has nothing to do with advance/resource reservation.
See also SHARETREE_RESERVED_USAGE below.
ENABLE_WINDOMACC
If this parameter is set to true, Windows Domain accounts (WinDomAcc) are used on Windows hosts.
These accounts require the use of sgepasswd(1). (See also sgepasswd(5).) If this parameter is
set to false, or is not set, local Windows accounts are used. On non-Windows hosts, this
parameter is ignored.
IGNORE_NGROUPS_MAX_LIMIT
If a user is assigned to NGROUPS_MAX-1 supplementary groups, so that Grid Engine is not able to
add one for job tracking, then the job will go into an error state when it is started.
(NGROUPS_MAX is the system limit on supplementary groups; see limits.h(7).) Administrators that
want to prevent the system doing so can set this parameter. In this case the NGROUPS_MAX limit is
ignored and the additional group (see gid_range) is not set. As a result for those jobs no online
usage will be available. Also the parameter ENABLE_ADDGRP_KILL will have no effect. Please note
that it is not recommended to use this parameter. Instead the group membership of the submit user
should be reduced.
KEEP_ACTIVE
This value should only be set for debugging purposes. If set to true, the execution daemon will
not remove the spool directory maintained by sge_shepherd(8) for a job, or cgroup directories if
cgroups are in use under Linux.
PTF_MIN_PRIORITY, PTF_MAX_PRIORITY
The maximum/minimum priority which Grid Engine will assign to a job. Typically this is a
negative/positive value in the range of -20 (maximum) to 19 (minimum) for systems which allow
setting of priorities with the nice(2) system call. Other systems may provide different ranges.
The default priority range (which varies from system to system) is installed either by removing
the parameters, or by setting a value of -999.
See the "messages" file of the execution daemon for the predefined default value on your hosts.
The values are logged during the startup of the execution daemon.
PROF_EXECD
Enables the profiling for the execution daemon (e.g. PROF_EXECD=true).
NOTIFY_KILL
This parameter allows you to change the notification signal for the signal SIGKILL (see the
-notify option of qsub(1)). The parameter either accepts signal names (use the -l option of
kill(1)) or the special value none. If set to none, no notification signal will be sent. If it is
set to TERM, for instance, or another signal name, then this signal will be sent as the
notification signal.
NOTIFY_SUSP
With this parameter it is possible to modify the notification signal for the signal SIGSTOP (see
the -notify parameter of qsub(1)). The parameter either accepts signal names (use the -l option
of kill(1)) or the special value none. If set to none, no notification signal will be sent. If it
is set to TSTP, for instance, or another signal name, then this signal will be sent as
notification signal.
SHARETREE_RESERVED_USAGE
If this parameter is set to true, the usage of "reserved" resources is taken for the Grid Engine
share tree consumption instead of measured usage. See the description of ACCT_RESERVED_USAGE
above for details.
Note: When running tightly integrated jobs with SHARETREE_RESERVED_USAGE set, and with
accounting_summary enabled in the parallel environment, reserved usage will only be reported by
the master task of the parallel job. No per-parallel task usage records will be sent from execd
to qmaster, which can significantly reduce load on qmaster when running large tightly integrated
parallel jobs.
USE_QSUB_GID
If this parameter is set to true, the primary group id active when a job was submitted will be
set to become the primary group id for job execution. If the parameter is not set, the primary
group id as defined for the job owner in the execution host passwd database is used.
The feature is only available for jobs submitted via qsub(1), qrsh(1), qmake(1) and qtcsh(1).
Also, it only works for qrsh(1) jobs (and thus also for qtcsh(1) and qmake(1)) if builtin
communication is used, or the rsh and rshd components which are provided with Grid Engine (see
remote_startup(5)).
S_DESCRIPTORS, H_DESCRIPTORS, S_MAXPROC, H_MAXPROC, S_MEMORYLOCKED, H_MEMORYLOCKED, S_LOCKS, H_LOCKS
Specifies soft and hard resource limits as implemented by the setrlimit(2) system call. See that
manual page on your system for more information. These parameters complete the list of limits set
by the RESOURCE LIMITS parameter of the queue configuration as described in queue_conf(5). Unlike
the resource limits in the queue configuration, these resource limits are set for every job on
this execution host. If a value is not specified, the resource limit is inherited from the
execution daemon process. Because this would lead to unpredictable results if only one limit of a
resource is set (soft or hard), the corresponding other limit is set to the same value.
S_DESCRIPTORS and H_DESCRIPTORS specify a value one greater than the maximum file descriptor
number that can be opened by any process of a job.
S_MAXPROC and H_MAXPROC specify the maximum number of processes that can be created by the job
user on this execution host.
S_MEMORYLOCKED and H_MEMORYLOCKED specify the maximum number of bytes of virtual memory that may
be locked into RAM. This typically needs to be set to "unlimited" for use with openib Infiniband,
and possibly similar transports.
S_LOCKS and H_LOCKS specify the maximum number of file locks any process of a job may establish.
All of these values can be specified using the multiplier letters k, K, m, M, g and G; see
sge_types(1) for details. Limits can be specified as "infinity" to remove limits (if possible),
per setrlimit(2).
INHERIT_ENV
This parameter indicates whether the shepherd should allow the environment inherited by the
execution daemon from the shell that started it to be inherited by the job it's starting. When
true, any environment variable that is set in the shell which starts the execution daemon at the
time the execution daemon is started will be set in the environment of any jobs run by that
execution daemon, unless the environment variable is explicitly overridden, such as PATH or
LOGNAME. If set to false, each job starts with only the environment variables that are explicitly
passed on by the execution daemon, such as PATH and LOGNAME. The default value is true.
SET_LIB_PATH
This parameter tells the execution daemon whether to add the Grid Engine shared library directory
to the library path of executed jobs. If set to true, and INHERIT_ENV is also set to true, the
Grid Engine shared library directory will be prepended to the library path which is inherited from
the shell which started the execution daemon. If INHERIT_ENV is set to false, the library path
will contain only the Grid Engine shared library directory. If set to false, and INHERIT_ENV is
set to true, the library path exported to the job will be the one inherited from the shell which
started the execution daemon. If INHERIT_ENV is also set to false, the library path will be
empty. After the execution daemon has set the library path, it may be further altered by the
shell in which the job is executed, or by the job script itself. The default value for
SET_LIB_PATH is false.
ENABLE_ADDGRP_KILL
If this parameter is set then Grid Engine uses the supplementary group ids (see gid_range) to
identify all processes which are to be terminated when a job is deleted, or when sge_shepherd(8)
cleans up after job termination. This currently only works under GNU/Linux, Solaris, Tru64,
FreeBSD, and Darwin. The default value is on. Irrelevant with cpuset support (see USE_CGROUPS
below).
PDC_INTERVAL
This parameter defines the interval (default 1s) between runs of the PDC (Portable Data Collector)
by the execution daemon. The PDC is responsible for enforcing the resource limits s_cpu, h_cpu,
s_vmem and h_vmem (see queue_conf(5)) and job usage collection. The parameter can be set to a
time_specifier (see sge_types(5)), to PER_LOAD_REPORT or to NEVER.
If this parameter is set to PER_LOAD_REPORT the PDC is triggered in the same interval as
load_report_time (see above). If this parameter is set to NEVER the PDC run is never triggered.
The default is 1 second.
Note: A PDC run is quite compute intensive, and may degrade the performance of the running jobs.
However, if the PDC runs less often, or never, the online usage can be incomplete or totally
missing (for example online usage of very short running jobs might be missing) and the resource
limit enforcement is less accurate or would not happen if PDC is turned off completely.
ENABLE_BINDING
If this parameter is set, then Grid Engine enables the core binding module within the execution
daemon to apply binding parameters that are specified at submission time of a job. This parameter
is set by default if Grid Engine was compiled with support for core binding. Find more
information for job to core binding in the section -binding of qsub(1).
SIMULATE_JOBS
Allow the simulation of jobs. (Job spooling and execution on the execd side is disabled.)
NO_AUTHENTICATION
Turn off authentication for the relevant host(s) when the authentication GSSAPI security feature
is enabled globally.
DO_AUTHENTICATION
Turn on authentication for the relevant host(s) when the authentication GSSAPI security feature is
enabled globally.
NO_SECURITY
Turn off storing and forwarding of credentials when the GSSAPI security feature is enabled
globally.
USE_SYSLOG
Write messages to the system logger (see syslog(3)) rather than into the spool directory.
USE_QIDLE
Automatically start any executable named qidle present in the architecture-dependent binary
directory as a load sensor, similarly to qloadsensor (which is run unconditionally). It is
intended to determine whether a workstation is "idle" or not, i.e. whether it has an interactive
load. See e.g. the idle time HOWTO ⟨http://arc.liv.ac.uk/SGE/howto/idle.html⟩ or
sources/experimental/qidle in the source repository, but it may be better to check the the
screensaver state.
USE_CGROUPS
[Linux only.] Use cgroups/cpusets for resource management if the system supports them and the
necessary directories exist in the relevant filesystems (possibly created by
util/resources/scripts/setup-cgroups-etc). Makes ENABLE_ADDGRP_KILL irrelevant. This option is
experimental, and at least the default is likely to change in future. Default is no.
USE_SMAPS
[Linux only.] Read processes' smaps file in the proc(5) filesystem to obtain PSS usage for most
accurate memory accounting, or to obtain the swap usage on older systems which don't report PSS.
That can be slow when processes have very many maps (observed with an FEM code), significantly
increasing the load from execd, so the default is no. Without smaps, usage is reported as
RSS+swap, instead of PSS+swap, or simply as the VMsize if the swap value isn't available.
print_malloc_info
See qmaster_params above.
DEMAND_LS
If true, generate load sensor reports just before sending them, making the data fresher. The
default is true. The switch is provided in case slow sensors are found to have a bad effect on
the execd.
Changing execd_params will take effect after it is propagated to the execution daemons. The propagation
is done in one load report interval. The default for execd_params is none.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
reporting_params
Used to define the behavior of reporting modules in the Grid Engine qmaster. Changes to the
reporting_params take immediate effect. The following values are recognized:
accounting
If this parameter is set to true, the accounting file is written. The accounting file is a
prerequisite for qacct(1).
reporting
If this parameter is set to true, the reporting file is written. The reporting file contains data
that can be used for monitoring and analysis, like job accounting, job log, host load and
consumables, queue status and consumables, and sharetree configuration and usage. Attention:
Depending on the size and load of the cluster, the reporting file can become quite large. Only
activate the reporting file if you have a process running that will consume the reporting file!
See reporting(5) for further information about the format and contents of the reporting file.
flush_time
The contents of the reporting file are buffered in the Grid Engine qmaster and flushed at a fixed
interval. This interval can be configured with the flush_time parameter. It is specified as a
time value in the format HH:MM:SS or a number of seconds. Sensible values range from a few
seconds to a minute. Setting it too low may slow down the qmaster. Setting it too high will make
the qmaster consume large amounts of memory for buffering data. The reporting file is opened and
closed for each flush. Default 15s.
accounting_flush_time
The contents of the accounting file are buffered in the Grid Engine qmaster and flushed at a fixed
interval. This interval can be configured with the accounting_flush_time parameter. It is
specified as a time value in the format HH:MM:SS. Sensible values range from a few seconds to one
minute. Setting it too low may slow down the qmaster. Setting it too high will make the qmaster
consume large amounts of memory for buffering data. Setting it to 0 disables buffering; as soon
as a record is generated, it will be written to the accounting file. If this parameter is not
set, the accounting data flush interval will default to the value of the flush_time parameter.
The accounting file is opened and closed for each flush.
joblog If this parameter is set to true, the reporting file will contain job logging information. See
reporting(5) for more information about job logging.
sharelog
The Grid Engine qmaster can dump information about sharetree configuration and use to the
reporting file. The parameter sharelog sets an interval in which sharetree information will be
dumped. It is set in the format HH:MM:SS or a number of seconds. A value of 0 (default)
configures qmaster not to dump sharetree information. Intervals of several minutes up to hours are
sensible values for this parameter. See reporting(5) for further information about sharelog.
log_consumables
This parameter controls writing of consumable resources to the reporting file. When set to
log_consumables=true information about all consumable resources (their current usage and their
capacity) will be written to the reporting file, whenever a consumable resource changes either in
definition, or in capacity, or when the usage of an arbitrary consumable resource changes. When
log_consumables is set to false (default), only those variables will be written to the reporting
file that are configured in the report_variables in the exec host configuration and whose
definition or value actually changed. This parameter is deprecated and will get removed in the
next major release. See host_conf(5) for further information about report_variables.
finished_jobs
Note: Deprecated, may be removed in a future release.
Grid Engine stores a certain number of just finished jobs to provide post mortem status information via
qstat -s z. The finished_jobs parameter defines the number of finished ("zombie") jobs stored. If this
maximum number is reached, the eldest finished job will be discarded for every new job added to the
finished job list. (The zombie list is not spooled, and so will be lost by a qmaster re-start.)
Changing finished_jobs will take immediate effect. The default for finished_jobs is 100.
This value is a global configuration parameter only. It cannot be overwritten by the execution host local
configuration.
qlogin_daemon
qlogin_command
rlogin_daemon
rlogin_command
rsh_daemon
rsh_command
These three pairs of entries are responsible for defining a remote startup method for either interactive
jobs by qlogin(1) or qrsh(1) without a command, or an interactive qrsh(1) request with a command. The
last startup method is also used to startup tasks on a slave exechost of a tightly integrated parallel
job. Each pair for one startup method must contain matching communication methods. All entries can
contain the value builtin (which is the default) or a full path to a binary which should be used, and
additional arguments to this command if necessary.
The entries for the three ..._command definitions can, in addition, contain the value NONE in case a
particular startup method should be disabled.
Changing any of these entries will take immediate effect.
The global configuration entries for these values may be overwritten by a execution host local
configuration.
See remote_startup(5) for a detailed explanation of these settings.
delegated_file_staging
This flag must be set to "true" when the prolog and epilog are ready for delegated file staging, so that
the DRMAA attribute 'drmaa_transfer_files' is supported. To establish delegated file staging, use the
variables beginning with "$fs_..." in prolog and epilog to move the input, output and error files from
one host to the other. When this flag is set to "false", no file staging is available for the DRMAA
interface. File staging is currently implemented only via the DRMAA interface. When an error occurs
while moving the input, output and error files, return error code 100 so that the error handling
mechanism can handle the error correctly. (See also FORBID_APPERROR.)
reprioritize
Note: Deprecated, may be removed in future release.
This flag enables or disables the reprioritization of jobs based on their ticket amount. The
reprioritize_interval in sched_conf(5) takes effect only if reprioritize is set to true. To turn off job
reprioritization, the reprioritize flag must be set to false and the reprioritize_interval to 0, which is
the default.
This value is a global configuration parameter only. It cannot be overridden by the execution host local
configuration.
jsv_url
This setting defines a server JSV instance which will be started and triggered by the sge_qmaster(8)
process. This JSV instance will be used to verify job specifications of jobs before they are accepted and
stored in the internal master database. The global configuration entry for this value cannot be
overwritten by execution host local configurations.
Find more details concerning JSV in jsv(1) and sge_request(1).
The syntax of the jsv_url is specified in sge_types(1).
jsv_allowed_mod
If there is a server JSV script defined with the jsv_url parameter, then all qalter(1) or qmon(1)
modification requests for jobs are rejected by qmaster. With the jsv_allowed_mod parameter an
administrator has the possibility to allow a set of switches which can then be used with clients to
modify certain job attributes. The value for this parameter has to be a comma-separated list of JSV job
parameter names as documented in qsub(1), or the value none to indicate that no modification should be
allowed. Please note that even if none is specified, the switches -w and -t are allowed for qalter.
libjvm_path
libjvm_path is usually set during qmaster installation and points to the absolute path of libjvm.so (or
the corresponding library depending on your architecture - e.g. /usr/java/jre/lib/i386/server/libjvm.so).
The referenced libjvm version must be at least 1.5. It is needed by the JVM qmaster thread only. If the
Java VM needs additional starting parameters they can be set in additional_jvm_args. Whether the JVM
thread is started at all can be defined in the bootstrap(5) file. If libjvm_path is empty, or an
incorrect path, the JVM thread fails to start.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
additional_jvm_args
additional_jvm_args is usually set during qmaster installation. Details about possible values
additional_jvm_args can be found in the help output of the accompanying Java command. This setting is
normally not needed.
The global configuration entry for this value may be overwritten by the execution host local
configuration.
SECURITY
If prolog or epilog is specified with a user@ prefix, security considerations apply. The methods are run
in a user-supplied environment (via -V or -v) which provides a mechanism to run arbitrary code as user
(which might well be root) by setting variables such as LD_LIBRARY_PATH and LD_PRELOAD to affect the
running of the dynamically linked programs, such as shells, which are used to implement the methods.
To combat this, known problematic variables are removed from the environment before starting the methods
other than as the job owner, but this may not be foolproof on arbitrary systems with obscure variables.
The environment can be safely controlled by running the methods under a statically-linked version of
env(1), such as typically available using busybox(1), for example. Use
/bin/busybox env -u ...
to unset sensitive variables, or
/bin/busybox env -i name=value...
to set only specific variables. On some systems, such as recent Solaris, it is essentially impossible to
build static binaries. In that case it is typically possible to use a setuid wrapper, relying on the
dynamic linker to do the right thing. An example is the safe_exec wrapper which is available from
⟨http://arc.liv.ac.uk/downloads/SGE/support/⟩ at the time of writing. When using a non-shell scripting
language wrapper for the method daemon, try to use options which avoid interpreter-specific environmental
damage, such as Perl's -T and Python's -E. Privileged shell script wrappers should be avoided if
possible, and should be written carefully if they are used - e.g. invoke programs with full file names -
but if bash(1) is used, it should be run with the -p option.
It is not currently possible to specify the variables unset, e.g. as a host-dependent execd parameter,
but certain system-dependent ones are selected. The list of sensitive variables is taken mostly from GNU
libc and sudo(1). It includes known system-dependent dynamic linker ones, sensitive locale ones and
others, like TMPDIR, but does not attempt to deal interpreter-specific variables such as PYTHONPATH. The
locale specification is also sanitized. See the source file source/libs/uti2/sge_execvlp.c for details.
Note that TMPDIR is one of the variables affected, and may need to be recreated (as
/tmp/$JOB_ID.$TASK_ID.$QUEUE).
SEE ALSO
sge_intro(1), csh(1), qconf(1), qsub(1), jsv(1), rsh(1), sh(1), getpwnam(3), drmaa_attributes(3),
queue_conf(5), sched_conf(5), sge_types(1), sge_execd(8), sge_qmaster(8), sge_shepherd(8), cron(8),
remote_startup(5)
COPYRIGHT
See sge_intro(1) for a full statement of rights and permissions.
SGE 8.1.3pre 2011-11-27 SGE_CONF(5)