Provided by: elastix_5.2.0-2ubuntu1_amd64 
NAME
transformix - manual page for transformix version: 5.2.0
DESCRIPTION
transformix version: 5.2.0
transformix applies a transform on an input image and/or generates a deformation field. The transform is
specified in the transform-parameter file.
--help, -h displays this message and exit
--version
output version information and exit
Call transformix from the command line with mandatory arguments:
-out output directory
-tp transform-parameter file, only 1
Optional extra commands:
-in input image to deform
-def file containing input-image points; the point are transformed according to the specified
transform-parameter file use "-def all" to transform all points from the input-image, which
effectively generates a deformation field.
-jac use "-jac all" to generate an image with the determinant of the spatial Jacobian
-jacmat
use "-jacmat all" to generate an image with the spatial Jacobian matrix at each voxel
-loglevel set the log level to "off", "error", "warning", or "info" (default),
-priority set the process priority to high, abovenormal, normal (default),
belownormal, or idle (Windows only option)
-threads
set the maximum number of threads of transformix
At least one of the options "-in", "-def", "-jac", or "-jacmat" should be given.
The transform-parameter file must contain all the information necessary for transformix to run properly.
That includes which transform to use, with which parameters, etc. For a usable transform-parameter file,
run elastix, and inspect the output file "TransformParameters.0.txt".
Need further help? Please check:
* the elastix website: https://elastix.dev * the source code repository site:
https://github.com/SuperElastix/elastix * the discussion forum:
https://groups.google.com/g/elastix-imageregistration