NAME

       srf2fasta - Converts SRF files to fasta format

SYNOPSIS

       srf2fasta  [-C] srf_archive

DESCRIPTION

       srf2fasta  extracts  sequences  from  an  SRF  archive  and writes them in fasta format to
       stdout.

OPTIONS

       -C     Masks out sequences tagged as bad quality.

EXAMPLES

       To extract only the good quality sequences from runX.srf into runX.fasta.

           srf2fasta -C runX.srf > runX.fasta

AUTHOR

       James Bonfield, Wellcome Trust Sanger Institute

                                           September 19                              srf2fasta(1)