Provided by: prime-phylo_1.0.11-1build2_amd64
NAME
chainsaw - Cut a gene tree based on a reconciliation
SYNOPSIS
chainsaw [OPTIONS] reconciled-gene-tree species-tree
DESCRIPTION
reconciled-gene-tree is the filename of the file containing trees in PRIME format. Notice that the node id is optional and if left out all species nodeswill be used recursively. species-tree is the species tree
OPTIONS
--help Display help (this text). -V, --version Print version and exit -g, --guest-tree-format primeOrHybrid|inputxml The input format. Default is primeOrHybrid -h, --host-tree-format primeOrHybrid|inputxml The input format of the host tree. Default is primeOrHybrid -x, --node-name=STRING A named species node to cut at -i, --node-id=INT The numerical id of a species node to cut at
EXIT STATUS
0 Successful program execution. 1 Some error occurred
URL
The prime-phylo home page: http://prime.sbc.su.se
SEE ALSO
primeDTLSR(1), primeDLRS(1), primeGEM(1), showtree(1), reconcile(1), reroot(1), tree2leafnames(1), treesize(1)