NAME

       Version - Tree reconstrucion

SYNOPSIS

       tree_recon -m <Phylip distance matrix> [Options]

DESCRIPTION

       Tree reconstrucion - TreeRecon

       -h, --help
              displays this help message

       -V, --version
              print version information

   Main Options:
       -m, --matrix <Phylip distance matrix>
              file with distance matrix At least 3 species required.

       -b, --build [nj, min, max, avg, wavg]
              tree building method (default nj)
               nj = Neighbor-joining
               min = UPGMA single linkage
               max = UPGMA complete linkage
               avg = UPGMA average linkage
               wavg = UPGMA weighted average linkage

              Neighbor-joining  creates  an  unrooted  tree. We root that tree at the last joined
              pair.

       -o, --outfile <Filename>
              output filename (default tree.dot)

       -f, --format [dot | newick]
              output format (default dot)

AUTHOR

       tree_recon was written by Tobias Rausch.

       This  manual  page  was  generated  using  html2man  and  polished  by  Soeren  Sonnenburg
       <sonne@debian.org>, for the Debian project (but may be used by others).

Version 1.01 (18. August 2009) Revision: 4September 2009                               VERSION(1)