Provided by: mia-tools_2.0.13-1_amd64
NAME
mia-2ddeform - Transform a 2D image by means of a vector field.
SYNOPSIS
mia-2ddeform -i <in-file> -o <out-file> -t <transformation> [options]
DESCRIPTION
mia-2ddeform This program is used to deform a 2D image using a deformation vector field. Input image and deformation field must be of the same size. The transformation formula is 'x -> x - v(x)'
OPTIONS
-i --in-file=(required) input image For supported file types see PLUGINS:2dimage/io -o --out-file=(required) transformed image For supported file types see PLUGINS:2dimage/io -t --transformation=(required) transformation vector field For supported file types see PLUGINS:2dvf/io -p --interpolator=bspline:d=3 image interpolator kernel For supported plugins see PLUGINS:1d/splinekernel Help & Info -V --verbose=warning verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are: info ‐ Low level messages warning ‐ Warnings error ‐ Report errors fail ‐ Report test failures message ‐ Normal messages fatal ‐ Report only fatal errors --copyright print copyright information -h --help print this help -? --usage print a short help --version print the version number and exit Processing --threads=-1 Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
PLUGINS: 1d/splinekernel
bspline B-spline kernel creation , supported parameters are: d = 3 (int) Spline degree. in [0, 5] omoms OMoms-spline kernel creation, supported parameters are: d = 3 (int) Spline degree. in [3, 3]
PLUGINS: 2dimage/io
bmp BMP 2D-image input/output support Recognized file extensions: .BMP, .bmp Supported element types: binary data, unsigned 8 bit, unsigned 16 bit datapool Virtual IO to and from the internal data pool Recognized file extensions: .@ dicom 2D image io for DICOM Recognized file extensions: .DCM, .dcm Supported element types: unsigned 16 bit exr a 2dimage io plugin for OpenEXR images Recognized file extensions: .EXR, .exr Supported element types: unsigned 32 bit, floating point 32 bit jpg a 2dimage io plugin for jpeg gray scale images Recognized file extensions: .JPEG, .JPG, .jpeg, .jpg Supported element types: unsigned 8 bit png a 2dimage io plugin for png images Recognized file extensions: .PNG, .png Supported element types: binary data, unsigned 8 bit, unsigned 16 bit raw RAW 2D-image output support Recognized file extensions: .RAW, .raw Supported element types: binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit tif TIFF 2D-image input/output support Recognized file extensions: .TIF, .TIFF, .tif, .tiff Supported element types: binary data, unsigned 8 bit, unsigned 16 bit, unsigned 32 bit vista a 2dimage io plugin for vista images Recognized file extensions: .V, .VISTA, .v, .vista Supported element types: binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
PLUGINS: 2dvf/io
datapool Virtual IO to and from the internal data pool Recognized file extensions: .@ exr a 2dvf io plugin for OpenEXR vfs Recognized file extensions: .EXR, .exr Supported element types: unsigned 32 bit, floating point 32 bit vista a 2d vector field io plugin for vista Recognized file extensions: .V, .VF, .v, .vf Supported element types: floating point 32 bit
EXAMPLE
Deform image input.png by using the transformation given in transform.v and store the result in deformed.png using linear interpolation mia-2ddeform -i input.png -t transform.v -o deformed.png -p bspline:d=1
AUTHOR(s)
Gert Wollny
COPYRIGHT
This software is Copyright (c) 1999‐2013 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.