Provided by: mia-tools_2.0.13-1_amd64
NAME
mia-3dvf2transform - Convert a 3D vectorfield from a 3D transformation.
SYNOPSIS
mia-3dvf2transform -i <in-file> -o <out-file> [options]
DESCRIPTION
mia-3dvf2transform Creates a 3D transformation from a vector field. The input vector field is simply encapsulated into the transformation file format. The boundary conditions and the image interpolator kernel can be set at the command line.
OPTIONS
-i --in-file=(required) input transformation For supported file types see PLUGINS:3dvf/io -o --out-file=(required) output vector field For supported file types see PLUGINS:3dtransform/io -k --imgkernel=bspline:d=3 image interpolator kernel which is used when the transformation is applied to an image For supported plugins see PLUGINS:1d/splinekernel -b --imgboundary=mirror Boundary condition applied when the transformation is used to transform an image For supported plugins see PLUGINS:1d/splinebc Help & Info -V --verbose=warning verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are: info ‐ Low level messages warning ‐ Warnings error ‐ Report errors fail ‐ Report test failures message ‐ Normal messages fatal ‐ Report only fatal errors --copyright print copyright information -h --help print this help -? --usage print a short help --version print the version number and exit Processing --threads=-1 Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
PLUGINS: 1d/splinebc
mirror Spline interpolation boundary conditions that mirror on the boundary (no parameters) repeat Spline interpolation boundary conditions that repeats the value at the boundary (no parameters) zero Spline interpolation boundary conditions that assumes zero for values outside (no parameters)
PLUGINS: 1d/splinekernel
bspline B-spline kernel creation , supported parameters are: d = 3 (int) Spline degree. in [0, 5] omoms OMoms-spline kernel creation, supported parameters are: d = 3 (int) Spline degree. in [3, 3]
PLUGINS: 3dtransform/io
bbs Binary (non-portable) serialized IO of 3D transformations Recognized file extensions: .bbs datapool Virtual IO to and from the internal data pool Recognized file extensions: .@ vista Vista storage of 3D transformations Recognized file extensions: .v, .v3dt xml XML serialized IO of 3D transformations Recognized file extensions: .x3dt
PLUGINS: 3dvf/io
cvista obsolete 3d vector field io plugin for range compressend vista (saving not supported) Recognized file extensions: .CVF, .cvf Supported element types: floating point 32 bit datapool Virtual IO to and from the internal data pool Recognized file extensions: .@ vista a 3d vector field io plugin for vista Recognized file extensions: .V, .VF, .v, .vf Supported element types: floating point 32 bit vtk 3D Vector field in- and output (experimental). No attributes are stored or read. Recognized file extensions: .VTK, .VTKVF, .vtk, .vtkvf Supported element types: floating point 32 bit
EXAMPLE
Transform the input vector field field.vtk to the transformation trans.v3df and specify zero boundary conditions and b-splines of degree 2 for image interpolation. mia-3dvf2transform -i field.vtk -o trans.v3df --imgkernel bspline:d=2 --imgboundary zero
AUTHOR(s)
Gert Wollny
COPYRIGHT
This software is Copyright (c) 1999‐2013 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.