Provided by: cpl-plugin-vimos-doc_2.9.9+dfsg-2_all 
NAME
vmmoscombine - Combine reduced MOS observations from different OBs.
SYNOPSIS
esorex vmmoscombine [OPTIONS] FILE.sof
DESCRIPTION
This recipe is used to sum the contributes from a sequence of 2D-extracted spectral frames
generated by the recipes vmmosobsstare, vmmosobsjitter, and vmmoscombine itself. The only
restriction is that all frames must be obtained with the same mask. Sky subtraction,
fringing correction, flat fielding, etc., are not applied, since they had been applied in
the previous reduction of each input dataset.
Each input image is corrected to airmass zero before the stacking, and for this reason an
atmospheric extinction table must always be specified. Optionally a correction for the
instrument response can also be applied.
Input files:
DO category: Type: Explanation: Required:
MOS_SCIENCE_EXTRACTED Product Combined slit spectra Y
GRISM_TABLE Calib Grism table Y
EXTINCT_TABLE Calib Atmospheric extinction Y
MOS_SPECPHOT_TABLE Calib Response curve .
Output files:
DO category: Data type: Explanation:
MOS_SCIENCE_REDUCED FITS image Extracted objects spectra
MOS_SCIENCE_FLUX_REDUCED FITS image Flux calibrated objects spectra
MOS_SCIENCE_EXTRACTED FITS image Combined slit spectra
OBJECT_TABLE FITS table Objects spectra identification
WINDOW_TABLE FITS table Objects positions in slit
The positions of the extracted slit spectra and of the detected objects that they may
contain are listed in the window table.
If a spectro-photometric table (produced by the recipe vmmosstandard) is specified and a
flux calibration is requested, then a MOS_SCIENCE_FLUX_REDUCED image is also created. This
image is identical to the MOS_SCIENCE_REDUCED, but the spectra it contains are flux
calibrated, and expressed in units of erg/cm/cm/s/Angstrom.
For more details, please refer to the VIMOS Pipeline User´s Guide.
OPTIONS
--StackMethod <str>
Frames combination method (str; default: ´Average´). The full name of this option
for the EsoRex configuration file is vimos.Parameters.stacking.method [default =
Average].
--KSigmaLow <float>
Low threshold for K-sigma clipping method. (float; default: 5.0). The full name of
this option for the EsoRex configuration file is
vimos.Parameters.stacking.ksigma.low [default = 5.0].
--KSigmaHigh <float>
High threshold for K-sigma clipping method. (float; default: 5.0). The full name of
this option for the EsoRex configuration file is
vimos.Parameters.stacking.ksigma.high [default = 5.0].
--MinRejection <long>
Number of lowest rejected values for rejection method. (long; default: 1). The full
name of this option for the EsoRex configuration file is
vimos.Parameters.stacking.minmax.minimum [default = 1].
--MaxRejection <long>
Number of highest rejected values for rejection method. (long; default: 1). The
full name of this option for the EsoRex configuration file is
vimos.Parameters.stacking.minmax.maximum [default = 1].
--DetectionLevel <float>
Object detection level in units of sigma. (float; default: 2.0). The full name of
this option for the EsoRex configuration file is vimos.Parameters.detection.sigma
[default = 2.0].
--WatershedLevels <long>
Number of levels in the watershed method in object detection. (long; default: 32).
The full name of this option for the EsoRex configuration file is
vimos.Parameters.detection.levels [default = 32].
--WatershedFraction <float>
Flux fraction to use in watershed. (float; default: 0.01). The full name of this
option for the EsoRex configuration file is vimos.Parameters.detection.fraction
[default = 0.01].
--MinObjectSize <long>
Minimal size for an object candidate to be considered an object. (long; default:
2). The full name of this option for the EsoRex configuration file is
vimos.Parameters.detection.minsize [default = 2].
--MaxObjectSize <long>
Maximal size for an object candidate for not trying deblend into sub- objects.
(long; default: 7). The full name of this option for the EsoRex configuration file
is vimos.Parameters.detection.maxsize [default = 7].
--CalibrateFlux <bool>
Extracted spectra are flux calibrated. (bool; default: False). The full name of
this option for the EsoRex configuration file is vimos.Parameters.flux.calibration
[default = False].
Note that it is possible to create a configuration file containing these options, along
with suitable default values. Please refer to the details provided by the 'esorex --help'
command.
SEE ALSO
The full documentation for the vimos pipeline can be downloaded as a PDF file using the
following URL:
ftp://ftp.eso.org/pub/dfs/pipelines/vimos/vimos-pipeline-manual-6.9.pdf
An overview over the existing ESO pipelines can be found on the web page
http://www.eso.org/sci/software/pipelines/.
Basic documentation about the EsoRex program can be found at the esorex (1) man page.
It is possible to call the pipelines from python using the python-cpl package. See
http://packages.python.org/python-cpl/index.html for further information.
The other recipes of the vimos pipeline are vmifucombinecube(7), vmifucalib(7),
vmimflatsky(7), vmspflat(7), vmmosobsstare(7), vmimflatscreen(7), vmimpreimaging(7),
vmimcalphot(7), vmimstandard(7), vmmosobsjitter(7), vmimobsstare(7), vmimobsjitter(7),
vmspphot(7), vmdet(7), vmmosscience(7), vmmosstandard(7), vmspcaldisp(7),
vmifustandard(7), vmbias(7), vmmoscalib(7), vmifucombine(7), vmdark(7), vmifuscience(7)
VERSION
vmmoscombine 2.9.9
AUTHOR
ESO VIMOS Pipeline Team and VIMOS Consortium <usd-help@eso.org>
BUG REPORTS
Please report any problems to usd-help@eso.org. Alternatively, you may send a report to
the ESO User Support Department <usd-help@eso.org>.
LICENSE
This file is part of the VIMOS Instrument Pipeline Copyright (C) 2002-2005 European
Southern Observatory
This program is free software; you can redistribute it and/or modify it under the terms of
the GNU General Public License as published by the Free Software Foundation; either
version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program;
if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
MA 02110-1301 USA