NAME

       votca-csg - The VOTCA coarse-graining engine

DESCRIPTION

       Versatile  Object-oriented  Toolkit  for Coarse-graining Applications (VOTCA) is a package
       intended to reduce the amount of routine work when  doing  systematic  coarse-graining  of
       various systems.  The core is written in C++. Iterative methods are implemented using bash
       + perl.

       Please visit the program site at __http://www.votca.org__.

SYNOPSIS

       The following commands make up the votca-csg suite.  Please refer to their individual  man
       pages for further details.

       csg_boltzmann
              Performs  tasks  that  are  needed for simple Boltzmann inversion in an interactive
              environment.

       csg_call
              Calls script from the interactive framework for the user.

       csg_density
              Calculates all kind of density profiles.

       csg_dump
              Prints atoms that are read from a topology file to help debug atom naming.

       csg_fmatch
              Performs force matching (also called multiscale coarse-graining).

       csg_gmxtopol
              Create skeleton for gromacs topology based on  atomistic  topology  and  a  mapping
              file.

       csg_imcrepack
              Is  internally  called  by inversion scripts to kick out zero entries in the matrix
              for inverse Monte Carlo (imc).

       csg_inverse
              Starts the script to run iterative Boltzmann inverse (ibi) or inverse  Monte  Carlo
              (imc), etc.

       csg_map
              Map a reference trajectory to a coarse-grained trajectory.

       csg_part_dist
              Outputs the time-averaged number of particles, listed by particle types.

       csg_property
              Helper program called by inverse scripts to parse xml file.

       csg_resample
              Changes grid + interval and interpolated any sort of table files.

       csg_stat
              Calculates  all kind of distribuions  (bonded + non-bonded).

       multi_g_rdf
              A multiplexed version of g_rdf

AUTHORS

       Written and maintained by the VOTCA Development Team <devs@votca.org>

       This   Manual   Page   converted   from   t2t  format  to  the  this  format  by  txt2tags
       (http://txt2tags.org) !

COPYRIGHT

       Copyright 2009-2011 The VOTCA Development Team (http://www.votca.org)

       Licensed under the Apache License, Version 2.0 (the "License"); you may not use this  file
       except in compliance with the License.  You may obtain a copy of the License at

           http://www.apache.org/licenses/LICENSE-2.0

       Unless  required by applicable law or agreed to in writing, software distributed under the
       License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY  KIND,
       either  express  or  implied.   See  the  License  for  the  specific  language  governing
       permissions and limitations under the License.