xenial (1) mia-2dmyoseries-compdice.1.gz

NAME

       mia-2dmyoseries-compdice - Evaluate the dice index between segmentations.

SYNOPSIS

       mia-2dmyoseries-compdice -1 <first> -2 <second> [options]

DESCRIPTION

       mia-2dmyoseries-compdice  This  program is used to evaluate the per-frame dice index of segmented regions
       of two image series

OPTIONS

              -1 --first=(input, required); string
                     first segmentation set

              -2 --second=(input, required); string
                     second segmentation set

              -k --skip=2
                     images to skip atthe begin of the seriesimages to skip atthe begin of the series

   Help & Info
              -V --verbose=warning
                     verbosity of output, print  messages  of  given  level  and  higher  priorities.  Supported
                     priorities starting at lowest level are:
                        info ‐ Low level messages
                        trace ‐ Function call trace
                        fail ‐ Report test failures
                        warning ‐ Warnings
                        error ‐ Report errors
                        debug ‐ Debug output
                        message ‐ Normal messages
                        fatal ‐ Report only fatal errors

                 --copyright
                     print copyright information

              -h --help
                     print this help

              -? --usage
                     print a short help

                 --version
                     print the version number and exit

   Processing
                 --threads=-1
                     Maxiumum  number  of  threads to use for processing,This number should be lower or equal to
                     the number of logical processor cores in the machine. (-1:  automatic  estimation).Maxiumum
                     number  of threads to use for processing,This number should be lower or equal to the number
                     of logical processor cores in the machine. (-1: automatic estimation).

EXAMPLE

       Evaluate the per-frame  dice  index  of  the  segmentations  of  set  segment.set  with  respect  to  the
       segmentation set reference.set skipping two images at the beginning.

       mia-2dmyoseries-compdice -i segment.set -r reference.set -k 2

AUTHOR(s)

       Gert Wollny

COPYRIGHT

       This  software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain.  It comes  with  ABSOLUTELY
       NO WARRANTY  and  you  may redistribute it under the terms of the GNU GENERAL PUBLIC  LICENSE  Version  3
       (or later). For more information run the program with the option '--copyright'.