NAME

       mia-3dlandmarks-transform - Transform 3D landmark positions.

SYNOPSIS

       mia-3dlandmarks-transform -i <in-file> -o <out-file> -t <transformation> [options]

DESCRIPTION

       mia-3dlandmarks-transform Transform the locations of the landmarks by means of a given 3D transformation.
       Note,  landmark transformations do the inverse of an image transformation (in a manner of speaking), i.e.
       given a transformation V(x) in an image transformation the pixel intensity at x is set  to  the  original
       intensity at V(x), while a landmark at x is moved to V(x).

OPTIONS

              -i --in-file=(input, required); io
                     input landmark set  For supported file types see PLUGINS:3dlandmarklist/io

              -o --out-file=(output, required); io
                     output landmark set  For supported file types see PLUGINS:3dlandmarklist/io

              -t --transformation=(input, required); io
                     transformation file  For supported file types see PLUGINS:3dtransform/io

   Help & Info
              -V --verbose=warning
                     verbosity  of  output,  print  messages  of  given  level  and higher priorities. Supported
                     priorities starting at lowest level are:
                        info ‐ Low level messages
                        trace ‐ Function call trace
                        fail ‐ Report test failures
                        warning ‐ Warnings
                        error ‐ Report errors
                        debug ‐ Debug output
                        message ‐ Normal messages
                        fatal ‐ Report only fatal errors

                 --copyright
                     print copyright information

              -h --help
                     print this help

              -? --usage
                     print a short help

                 --version
                     print the version number and exit

   Processing
                 --threads=-1
                     Maxiumum number of threads to use for processing,This number should be lower  or  equal  to
                     the  number  of logical processor cores in the machine. (-1: automatic estimation).Maxiumum
                     number of threads to use for processing,This number should be lower or equal to the  number
                     of logical processor cores in the machine. (-1: automatic estimation).

PLUGINS: 3dlandmarklist/io

       datapool  Virtual IO to and from the internal data pool

                     Recognized file extensions:  .@

       lmx       IO plugin to load and store 3D landmark lists

                     Recognized file extensions:  .lmx

PLUGINS: 3dtransform/io

       bbs       Binary (non-portable) serialized IO of 3D transformations

                     Recognized file extensions:  .bbs

       datapool  Virtual IO to and from the internal data pool

                     Recognized file extensions:  .@

       vista     Vista storage of 3D transformations

                     Recognized file extensions:  .v, .v3dt

       xml       XML serialized IO of 3D transformations

                     Recognized file extensions:  .x3dt

EXAMPLE

       Transform  the  landmarks  given in input.lmx by applyning the transfromation stored in trans.v and store
       the result in output.lmx

       mia-3dlandmarks-transform -i input.lmx -t trans.v  -o output.lmx

AUTHOR(s)

       Gert Wollny

COPYRIGHT

       This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain.  It comes  with   ABSOLUTELY
       NO  WARRANTY   and   you  may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3
       (or later). For more information run the program with the option '--copyright'.

USER COMMANDS                                        v2.2.7                         mia-3dlandmarks-transform(1)